RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PCDHB15Q9Y5E8 787 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 CETN3O15182 167 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 TMTC2Q8N394 836 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 LMBR1Q8WVP7 490 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 STIM2Q9P246 746 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 GPATCH8Q9UKJ3 1502 aaKnown RBP6.41□□□□□ -1.38
VCAN-201ENST00000265077 FBXO38Q6PIJ6 1188 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 SREK1Q8WXA9 508 aaKnown RBP6.41□□□□□ -1.38
VCAN-201ENST00000265077 TBC1D5Q92609 795 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 GUCY1B3Q02153 619 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 KIF5AQ12840 1032 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 CNGA4Q8IV77 575 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.41□□□□□ -1.38
VCAN-201ENST00000265077 CUL5Q93034 780 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 SATB2Q9UPW6 733 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 MATR3P43243 847 aaKnown RBP eCLIP6.41□□□□□ -1.38
VCAN-201ENST00000265077 WDR78Q5VTH9 848 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 ETAA1Q9NY74 926 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 BAIAP2L1Q9UHR4 511 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 NBPF7P0C2Y1 421 aaPredicted RBP6.41□□□□□ -1.38
VCAN-201ENST00000265077 PDE1AP54750 535 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 EP400NLQ6ZTU2 488 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 ERMNQ8TAM6 284 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 PPFIA2O75334 1257 aa6.41□□□□□ -1.38
VCAN-201ENST00000265077 GOLGA6BA6NDN3 693 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 SDCCAG8Q86SQ7 713 aaPredicted RBP6.4□□□□□ -1.38
VCAN-201ENST00000265077 MIS18AQ9NYP9 233 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 MYH7P12883 1935 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 BICDL2A1A5D9 508 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 RANBP6O60518 1105 aaKnown RBP6.4□□□□□ -1.38
VCAN-201ENST00000265077 CLCN6P51797 869 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 ZNF75DP51815 510 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 PPP4R3AQ6IN85 833 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 CCDC129Q6ZRS4 1044 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 ZNF444Q8N0Y2 327 aaPredicted RBP6.4□□□□□ -1.38
VCAN-201ENST00000265077 ANKRD44Q8N8A2 993 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 PRDM11Q9NQV5 511 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 WASLO00401 505 aaPredicted RBP6.4□□□□□ -1.38
VCAN-201ENST00000265077 ZBTB43O43298 467 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 CFAP57Q96MR6 1250 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 PUS7Q96PZ0 661 aaKnown RBP6.4□□□□□ -1.38
VCAN-201ENST00000265077 EXOC1Q9NV70 894 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 CWC25Q9NXE8 425 aaPredicted RBP6.4□□□□□ -1.38
VCAN-201ENST00000265077 MYH15Q9Y2K3 1946 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 KRT86O43790 486 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 VAV2P52735 878 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 MAP3K9P80192 1104 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 RTN1Q16799 776 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 CCDC96Q2M329 555 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 MYD88Q99836 296 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 MAST1Q9Y2H9 1570 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 SEC24BO95487 1268 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 CCT5P48643 541 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 TDRD12Q587J7 1177 aaKnown RBP6.4□□□□□ -1.38
VCAN-201ENST00000265077 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
VCAN-201ENST00000265077 KIAA1524Q8TCG1 905 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 RTL1A6NKG5 1358 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 KNL1Q8NG31 2342 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 RHOXF2BP0C7M4 288 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 PDE4BQ07343 736 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 RHOXF2Q9BQY4 288 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 TMOD2Q9NZR1 351 aa6.4□□□□□ -1.38
VCAN-201ENST00000265077 EFCAB8A8MWE9 144 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 MINDY4BA8MYZ0 360 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 GNAQP50148 359 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 SLC30A9Q6PML9 568 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 SMARCC2Q8TAQ2 1214 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 USP6NLQ92738 828 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 JAKMIP2Q96AA8 810 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 ANTXR1Q9H6X2 564 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 SPTLC3Q9NUV7 552 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 ALDH1L1O75891 902 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 RPSAP08865 295 aaKnown RBP6.4□□□□□ -1.39
VCAN-201ENST00000265077 TRIM14Q14142 442 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 CYB5RLQ6IPT4 315 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 FERMT1Q9BQL6 677 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 CROCCQ5TZA2 2017 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 LLPHQ9BRT6 129 aaKnown RBP6.4□□□□□ -1.39
VCAN-201ENST00000265077 LMBRD1Q9NUN5 540 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 MAP3K2Q9Y2U5 619 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 RABGAP1Q9Y3P9 1069 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 BAG3O95817 575 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 MCMDC2Q4G0Z9 681 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 ANKLE2Q86XL3 938 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 RASEFQ8IZ41 740 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 TBC1D22AQ8WUA7 517 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 CPLX3Q8WVH0 158 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 DACT1Q9NYF0 836 aa6.4□□□□□ -1.39
VCAN-201ENST00000265077 POLR3DP05423 398 aaPredicted RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 SPDL1Q96EA4 605 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 SLFN14P0C7P3 912 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 ANKRD7Q92527 254 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 PLXNC1O60486 1568 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 COL17A1Q9UMD9 1497 aaPredicted RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 DNM1Q05193 864 aaKnown RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 UBE4AQ14139 1066 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 KIAA0753Q2KHM9 967 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 CARD6Q9BX69 1037 aa6.39□□□□□ -1.39
VCAN-201ENST00000265077 LARSQ9P2J5 1176 aaKnown RBP6.39□□□□□ -1.39
VCAN-201ENST00000265077 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms