RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 FYB2Q5VWT5 728 aa13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 NAA16Q6N069 864 aaPredicted RBP13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 C16orf71Q8IYS4 520 aaPredicted RBP13.98□□□□□ -0.17
ARFGEF1-201ENST00000262215 CCDC169A6NNP5 214 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 CHRNA2Q15822 529 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 KCNH5Q8NCM2 988 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 TRIM75PA6NK02 468 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 GIPC1O14908 333 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 SMIM24O75264 130 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 SDSP20132 328 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 SPAG1Q07617 926 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 ERCC6LQ2NKX8 1250 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 MORC4Q8TE76 937 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 PRPF31Q8WWY3 499 aaKnown RBP13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 RASSF4Q9H2L5 321 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 NDUFAB1O14561 156 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 ST5P78524 1137 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 ZNF174Q15697 407 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 EVCP57679 992 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 LCA5Q86VQ0 697 aa13.97□□□□□ -0.17
ARFGEF1-201ENST00000262215 TRAF5O00463 557 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 VSIG1Q86XK7 387 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 FNBP1Q96RU3 617 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 DDX21Q9NR30 783 aaKnown RBP eCLIP13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 VWA3AA6NCI4 1184 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 EIF6P56537 245 aaKnown RBP13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 BEND3Q5T5X7 828 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 LMNTD2Q8IXW0 634 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 OGFOD1Q8N543 542 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 GSTO1P78417 241 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 NAIPQ13075 1403 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 KRT2P35908 639 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 KLHL7Q8IXQ5 586 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 SWAP70Q9UH65 585 aa13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 SAP30BPQ9UHR5 308 aaKnown RBP13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 PA2G4Q9UQ80 394 aaKnown RBP13.96□□□□□ -0.17
ARFGEF1-201ENST00000262215 WDR46O15213 610 aaKnown RBP13.96□□□□□ -0.18
ARFGEF1-201ENST00000262215 HDXQ7Z353 690 aa13.96□□□□□ -0.18
ARFGEF1-201ENST00000262215 MSANTD4Q8NCY6 345 aa13.96□□□□□ -0.18
ARFGEF1-201ENST00000262215 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.18
ARFGEF1-201ENST00000262215 NOP9Q86U38 636 aaKnown RBP13.96□□□□□ -0.18
ARFGEF1-201ENST00000262215 MCM9Q9NXL9 1143 aa13.96□□□□□ -0.18
ARFGEF1-201ENST00000262215 DDX39AO00148 427 aaKnown RBP13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 GBP1P32455 592 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 A0A1B0GVL5 298 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 STX10O60499 249 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 TNFAIP3P21580 790 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 ALDH1L2Q3SY69 923 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 HMG20BQ9P0W2 317 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 LETM2Q2VYF4 491 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 TRIM68Q6AZZ1 485 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 GPR161Q8N6U8 529 aaKnown RBP13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 CXorf38Q8TB03 319 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 NACA2Q9H009 215 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 CCDC152Q4G0S7 254 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 FCHSD1Q86WN1 690 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 RILPQ96NA2 401 aa13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.95□□□□□ -0.18
ARFGEF1-201ENST00000262215 F13A1P00488 732 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 RHPN1Q8TCX5 695 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 TBC1D7Q9P0N9 293 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 MAGEB6P1A0A0J9YX57 407 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 RFX1P22670 979 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 ZYXQ15942 572 aaKnown RBP13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 WDR44Q5JSH3 913 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 ARFGAP2Q8N6H7 521 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 CCDC26Q8TAB7 109 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 JAKMIP2Q96AA8 810 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 BAG1Q99933 345 aaPredicted RBP13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 RAD51AP2Q09MP3 1159 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 CCDC89Q8N998 374 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 NOC4LQ9BVI4 516 aaKnown RBP13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 DTHD1Q6ZMT9 781 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 IFT74Q96LB3 600 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 ANO3Q9BYT9 981 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 MAP7Q14244 749 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 ZNF365Q70YC5 407 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 GPCPD1Q9NPB8 672 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 BICDL2A1A5D9 508 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 RAB3GAP1Q15042 981 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 PTPROQ16827 1216 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 AMOTQ4VCS5 1084 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 MAGEB6Q8N7X4 407 aa13.94□□□□□ -0.18
ARFGEF1-201ENST00000262215 NMIQ13287 307 aaPredicted RBP13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 HHATQ5VTY9 493 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 C17orf53Q8N3J3 647 aaPredicted RBP13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 ANKRD24Q8TF21 1146 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 ZNF408Q9H9D4 720 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 HDAC9Q9UKV0 1011 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 MX2P20592 715 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 OGFRQ9NZT2 677 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 ASIC3Q9UHC3 531 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 A0A1B0GUA9 196 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms