RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 SPOPO43791 374 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 AFAP1L2Q8N4X5 818 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 DACT3Q96B18 629 aaPredicted RBP9.74□□□□□ -0.85
YIPF4-201ENST00000238831 ZHX1Q9UKY1 873 aaPredicted RBP9.74□□□□□ -0.85
YIPF4-201ENST00000238831 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 HFM1A2PYH4 1435 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 VIMP08670 466 aaKnown RBP9.74□□□□□ -0.85
YIPF4-201ENST00000238831 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.74□□□□□ -0.85
YIPF4-201ENST00000238831 SMTNP53814 917 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 SLFN5Q08AF3 891 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 RTL9Q8NET4 1388 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 KRT83P78385 493 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 GKAP1Q5VSY0 366 aaPredicted RBP9.74□□□□□ -0.85
YIPF4-201ENST00000238831 GBP7Q8N8V2 638 aaPredicted RBP9.74□□□□□ -0.85
YIPF4-201ENST00000238831 MIPOL1Q8TD10 442 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 CHPF2Q9P2E5 772 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 KRT86O43790 486 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 CALML3P27482 149 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 GTF2A1P52655 376 aaPredicted RBP9.74□□□□□ -0.85
YIPF4-201ENST00000238831 UIMC1Q96RL1 719 aa9.74□□□□□ -0.85
YIPF4-201ENST00000238831 CFAP65Q6ZU64 1925 aaKnown RBP9.74□□□□□ -0.85
YIPF4-201ENST00000238831 PLCG2P16885 1265 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 SYT1P21579 422 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 EIF6P56537 245 aaKnown RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 SAMD15Q9P1V8 674 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 PLEKHH2Q8IVE3 1493 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 CEBPAP49715 358 aaPredicted RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 RNASE9P60153 205 aaKnown RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 CALCOCO2Q13137 446 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 PAXBP1Q9Y5B6 917 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 PIK3R4Q99570 1358 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 CFTRP13569 1480 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 LRRC9Q6ZRR7 1453 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 KRT19P08727 400 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 ZNF526Q8TF50 670 aaPredicted RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 MAN1A1P33908 653 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 PPARDQ03181 441 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 HELBQ8NG08 1087 aaPredicted RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 LZTFL1Q9NQ48 299 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 HAUS2Q9NVX0 235 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 CNPY2Q9Y2B0 182 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 HGSO14964 777 aaPredicted RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 GPR161Q8N6U8 529 aaKnown RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 ERICH3Q5RHP9 1530 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 TRIM75PA6NK02 468 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 PARP1P09874 1014 aaKnown RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 RHOXF2BP0C7M4 288 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 XRCC6P12956 609 aaKnown RBP eCLIP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 TBC1D9Q6ZT07 1266 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 RHOXF2Q9BQY4 288 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 RXRAP19793 462 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 PLCB4Q15147 1175 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 GABPB2Q8TAK5 448 aaPredicted RBP9.73□□□□□ -0.85
YIPF4-201ENST00000238831 XAGE3Q8WTP9 111 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 USTQ9Y2C2 406 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 TOM1O60784 492 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 NKIRAS1Q9NYS0 192 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 SLC39A6Q13433 755 aa9.73□□□□□ -0.85
YIPF4-201ENST00000238831 RFC1P35251 1148 aaPredicted RBP9.72□□□□□ -0.85
YIPF4-201ENST00000238831 MCMDC2Q4G0Z9 681 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 FAM47CQ5HY64 1035 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 EYA3Q99504 573 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 ZKSCAN3Q9BRR0 538 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 MSH6P52701 1360 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 FAM170AA1A519 330 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 DZIP3Q86Y13 1208 aaKnown RBP9.72□□□□□ -0.85
YIPF4-201ENST00000238831 CDAN1Q8IWY9 1227 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 CSRNP2Q9H175 543 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 FAM135AQ9P2D6 1515 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 ZFYP08048 801 aaPredicted RBP9.72□□□□□ -0.85
YIPF4-201ENST00000238831 DDB1Q16531 1140 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 KIAA1107Q9UPP5 1409 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 GNA11P29992 359 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 PDE1CQ14123 709 aaPredicted RBP9.72□□□□□ -0.85
YIPF4-201ENST00000238831 TPTE2Q6XPS3 522 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 VPS18Q9P253 973 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 ZNF569Q5MCW4 686 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 SKAP1Q86WV1 359 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 RNF169Q8NCN4 708 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 RBM17Q96I25 401 aaKnown RBP9.72□□□□□ -0.85
YIPF4-201ENST00000238831 RTL1A6NKG5 1358 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 CCNT1O60563 726 aaKnown RBP9.72□□□□□ -0.85
YIPF4-201ENST00000238831 TSTA3Q13630 321 aaPredicted RBP9.72□□□□□ -0.85
YIPF4-201ENST00000238831 SH2D4BQ5SQS7 431 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 SPAG1Q07617 926 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 MED10Q9BTT4 135 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 SMARCA4P51532 1647 aa9.72□□□□□ -0.85
YIPF4-201ENST00000238831 FAM83GA6ND36 823 aa9.71□□□□□ -0.85
YIPF4-201ENST00000238831 SKILP12757 684 aa9.71□□□□□ -0.85
YIPF4-201ENST00000238831 ZNF131P52739 623 aa9.71□□□□□ -0.85
YIPF4-201ENST00000238831 WDR66Q8TBY9 1149 aa9.71□□□□□ -0.85
YIPF4-201ENST00000238831 ARHGEF10LQ9HCE6 1279 aa9.71□□□□□ -0.85
YIPF4-201ENST00000238831 IRAK4Q9NWZ3 460 aa9.71□□□□□ -0.85
YIPF4-201ENST00000238831 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.85
YIPF4-201ENST00000238831 CTNND2Q9UQB3 1225 aa9.71□□□□□ -0.85
YIPF4-201ENST00000238831 TNFAIP3P21580 790 aa9.71□□□□□ -0.85
YIPF4-201ENST00000238831 RARSP54136 660 aaKnown RBP9.71□□□□□ -0.85
YIPF4-201ENST00000238831 LETM2Q2VYF4 491 aa9.71□□□□□ -0.85
YIPF4-201ENST00000238831 FYB2Q5VWT5 728 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms