RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 FDPSP14324 419 aaKnown RBP16.27■□□□□ 0.19
PCDHB3-201ENST00000231130 PFKFB1P16118 471 aa16.27■□□□□ 0.19
PCDHB3-201ENST00000231130 LMBR1LQ6UX01 489 aa16.27■□□□□ 0.19
PCDHB3-201ENST00000231130 L2HGDHQ9H9P8 463 aa16.27■□□□□ 0.19
PCDHB3-201ENST00000231130 CEP83Q9Y592 693 aa16.27■□□□□ 0.19
PCDHB3-201ENST00000231130 USPL1Q5W0Q7 1092 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 CPLX3Q8WVH0 158 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 CLIC6Q96NY7 704 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 IMPACTQ9P2X3 320 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 FAM208AQ9UK61 1670 aaKnown RBP16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 CARMIL3Q8ND23 1372 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 CCDC172P0C7W6 258 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 PTPN12Q05209 780 aaKnown RBP16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 CC2D1AQ6P1N0 951 aaPredicted RBP16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 ZNF594Q96JF6 807 aaPredicted RBP16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 TDO2P48775 406 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 HSP90B2PQ58FF3 399 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 PPM1EQ8WY54 764 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 IRX2Q9BZI1 471 aaPredicted RBP16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 PDE11AQ9HCR9 933 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 FANCLQ9NW38 375 aa16.26■□□□□ 0.19
PCDHB3-201ENST00000231130 FANCGO15287 622 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 HOXB7P09629 217 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 SYKP43405 635 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 MMP14P50281 582 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 ESCO1Q5FWF5 840 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 REXO1L1PQ8IX06 675 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 ANKRD20A12PQ8NF67 263 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 EXOC4Q96A65 974 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 CXorf56Q9H5V9 222 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 DDX21Q9NR30 783 aaKnown RBP eCLIP16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 PAG1Q9NWQ8 432 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 MAP2K2P36507 400 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 NLRP12P59046 1061 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 DNAJC21Q5F1R6 531 aaKnown RBP16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 WDR24Q96S15 920 aa16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 LLPHQ9BRT6 129 aaKnown RBP16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 PUF60Q9UHX1 559 aaKnown RBP16.25■□□□□ 0.19
PCDHB3-201ENST00000231130 PSDA5PKW4 1024 aaPredicted RBP16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 KIF28PB7ZC32 967 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 ANKRD13DQ6ZTN6 518 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 ALDH8A1Q9H2A2 487 aaPredicted RBP16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 ZNF827Q17R98 1081 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 MYSM1Q5VVJ2 828 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 CCDC82Q8N4S0 544 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 KBTBD3Q8NAB2 608 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 IP6K1Q92551 441 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 ZNF622Q969S3 477 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 TPM1P09493 284 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 KCNA6P17658 529 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 TRMT44Q8IYL2 757 aaKnown RBP16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 LZTFL1Q9NQ48 299 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 TNRQ92752 1358 aa16.24■□□□□ 0.19
PCDHB3-201ENST00000231130 WDHD1O75717 1129 aaPredicted RBP16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 NCAPHQ15003 741 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 CCDC93Q567U6 631 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 PARD6BQ9BYG5 372 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 RABEP2Q9H5N1 569 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 H3BQF6 201 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 KCNG4Q8TDN1 519 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 RTEL1Q9NZ71 1219 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 WWC2Q6AWC2 1192 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 OLFM4Q6UX06 510 aa16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 CCDC12Q8WUD4 166 aaPredicted RBP16.23■□□□□ 0.19
PCDHB3-201ENST00000231130 AKAP12Q02952 1782 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 FOXN1O15353 648 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 PHKBQ93100 1093 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 LONRF2Q1L5Z9 754 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 TRIM65Q6PJ69 517 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 HAUS7Q99871 368 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 FAN1Q9Y2M0 1017 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 PPP2R2CQ9Y2T4 447 aa16.22■□□□□ 0.19
PCDHB3-201ENST00000231130 SPATA31D1Q6ZQQ2 1576 aa16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 PRC1O43663 620 aa16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 PPP2R3AQ06190 1150 aa16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 DHX8Q14562 1220 aaKnown RBP16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 LRRFIP1Q32MZ4 808 aaKnown RBP16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 CCDC158Q5M9N0 1113 aa16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 RALYLQ86SE5 291 aaKnown RBP16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 DENND2AQ9ULE3 1009 aa16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 EFCAB8A8MWE9 144 aa16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 TADA3O75528 432 aa16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 LIG3P49916 1009 aa16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 RGPD1P0DJD0 1748 aa16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
PCDHB3-201ENST00000231130 TOGARAM2Q6ZUX3 1019 aa16.21■□□□□ 0.18
PCDHB3-201ENST00000231130 SRRTQ9BXP5 876 aaKnown RBP16.21■□□□□ 0.18
PCDHB3-201ENST00000231130 SUFUQ9UMX1 484 aa16.21■□□□□ 0.18
PCDHB3-201ENST00000231130 PARP3Q9Y6F1 533 aa16.21■□□□□ 0.18
PCDHB3-201ENST00000231130 MROH7-TTC4A0A0A0MT08 1334 aa16.21■□□□□ 0.18
PCDHB3-201ENST00000231130 M0R2C6 588 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms