RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RIOK3O14730 519 aaKnown RBP17.05■□□□□ 0.32
CNOT3-201ENST00000221232 CYP19A1P11511 503 aaPredicted RBP17.05■□□□□ 0.32
CNOT3-201ENST00000221232 ADD2P35612 726 aa17.05■□□□□ 0.32
CNOT3-201ENST00000221232 CTDSPL2Q05D32 466 aa17.05■□□□□ 0.32
CNOT3-201ENST00000221232 RRP12Q5JTH9 1297 aaKnown RBP17.05■□□□□ 0.32
CNOT3-201ENST00000221232 DZIP3Q86Y13 1208 aaKnown RBP17.05■□□□□ 0.32
CNOT3-201ENST00000221232 LINC00301Q8NCQ3 95 aa17.05■□□□□ 0.32
CNOT3-201ENST00000221232 MRPS27Q92552 414 aaKnown RBP17.05■□□□□ 0.32
CNOT3-201ENST00000221232 TEX13AQ9BXU3 409 aaPredicted RBP17.04■□□□□ 0.32
CNOT3-201ENST00000221232 SEC31BQ9NQW1 1179 aa17.04■□□□□ 0.32
CNOT3-201ENST00000221232 PDE8BO95263 885 aa17.04■□□□□ 0.32
CNOT3-201ENST00000221232 TPM3P06753 285 aa17.04■□□□□ 0.32
CNOT3-201ENST00000221232 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
CNOT3-201ENST00000221232 ACSBG1Q96GR2 724 aa17.04■□□□□ 0.32
CNOT3-201ENST00000221232 ZKSCAN3Q9BRR0 538 aa17.04■□□□□ 0.32
CNOT3-201ENST00000221232 SPTLC2O15270 562 aa17.03■□□□□ 0.32
CNOT3-201ENST00000221232 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
CNOT3-201ENST00000221232 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
CNOT3-201ENST00000221232 CDC27P30260 824 aa17.03■□□□□ 0.32
CNOT3-201ENST00000221232 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
CNOT3-201ENST00000221232 MYSM1Q5VVJ2 828 aa17.03■□□□□ 0.32
CNOT3-201ENST00000221232 DHX40Q8IX18 779 aaKnown RBP17.03■□□□□ 0.32
CNOT3-201ENST00000221232 FMR1NBQ8N0W7 255 aaPredicted RBP17.03■□□□□ 0.32
CNOT3-201ENST00000221232 AIDAQ96BJ3 306 aa17.03■□□□□ 0.32
CNOT3-201ENST00000221232 PRIMPOLQ96LW4 560 aa17.03■□□□□ 0.32
CNOT3-201ENST00000221232 ALG1Q9BT22 464 aa17.03■□□□□ 0.32
CNOT3-201ENST00000221232 PDE6AP16499 860 aa17.03■□□□□ 0.32
CNOT3-201ENST00000221232 METAP2P50579 478 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■□□□□ 10.5
CNOT3-201ENST00000221232 CHAF1AQ13111 956 aaPredicted RBP17.03■□□□□ 0.32
CNOT3-201ENST00000221232 MAGEB6Q8N7X4 407 aa17.03■□□□□ 0.32
CNOT3-201ENST00000221232 RTEL1Q9NZ71 1219 aa17.03■□□□□ 0.32
CNOT3-201ENST00000221232 PRKAB2O43741 272 aa17.02■□□□□ 0.32
CNOT3-201ENST00000221232 TPD52L1Q16890 204 aaPredicted RBP17.02■□□□□ 0.32
CNOT3-201ENST00000221232 ADALQ6DHV7 355 aa17.02■□□□□ 0.32
CNOT3-201ENST00000221232 CMTR1Q8N1G2 835 aaKnown RBP17.02■□□□□ 0.32
CNOT3-201ENST00000221232 PLA2G12BQ9BX93 195 aa17.02■□□□□ 0.32
CNOT3-201ENST00000221232 ARMT1Q9H993 441 aa17.02■□□□□ 0.32
CNOT3-201ENST00000221232 ANO10Q9NW15 660 aa17.02■□□□□ 0.32
CNOT3-201ENST00000221232 TRMT1Q9NXH9 659 aaKnown RBP17.02■□□□□ 0.32
CNOT3-201ENST00000221232 CTAGE5O15320 804 aa17.02■□□□□ 0.31
CNOT3-201ENST00000221232 DPCR1Q3MIW9 517 aa17.02■□□□□ 0.31
CNOT3-201ENST00000221232 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.31
CNOT3-201ENST00000221232 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
CNOT3-201ENST00000221232 ANGEL1Q9UNK9 670 aaKnown RBP17.01■□□□□ 0.31
CNOT3-201ENST00000221232 EXOC5O00471 708 aa17.01■□□□□ 0.31
CNOT3-201ENST00000221232 PDE8AO60658 829 aa17.01■□□□□ 0.31
CNOT3-201ENST00000221232 RIC1Q4ADV7 1423 aa17.01■□□□□ 0.31
CNOT3-201ENST00000221232 NEDD4P46934 1319 aa17.01■□□□□ 0.31
CNOT3-201ENST00000221232 LAMA4Q16363 1823 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 WDHD1O75717 1129 aaPredicted RBP17■□□□□ 0.31
CNOT3-201ENST00000221232 EVCP57679 992 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 KIF23Q02241 960 aaPredicted RBP17■□□□□ 0.31
CNOT3-201ENST00000221232 VGLL2Q8N8G2 317 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 MIGA1Q8NAN2 632 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 TNS2Q63HR2 1409 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 TJP1Q07157 1748 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 USP27XA6NNY8 438 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 ZNF202O95125 648 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 MBD4O95243 580 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 TNNT1P13805 278 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 BCAMP50895 628 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 TMEM67Q5HYA8 995 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 SPECC1Q5M775 1068 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 SUSD4Q5VX71 490 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 ANO1Q5XXA6 986 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 CEP57L1Q8IYX8 460 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 CLIC6Q96NY7 704 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 MPHOSPH8Q99549 860 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 BCL2L12Q9HB09 334 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 FBXO3Q9UK99 471 aa17■□□□□ 0.31
CNOT3-201ENST00000221232 WTIPA6NIX2 430 aaPredicted RBP16.99■□□□□ 0.31
CNOT3-201ENST00000221232 PTPN21Q16825 1174 aa16.99■□□□□ 0.31
CNOT3-201ENST00000221232 LRRC8AQ8IWT6 810 aa16.99■□□□□ 0.31
CNOT3-201ENST00000221232 IFIT3O14879 490 aaKnown RBP16.99■□□□□ 0.31
CNOT3-201ENST00000221232 SMC2O95347 1197 aa16.99■□□□□ 0.31
CNOT3-201ENST00000221232 SLC3A2P08195 630 aaKnown RBP16.99■□□□□ 0.31
CNOT3-201ENST00000221232 ATP2B1P20020 1258 aa16.99■□□□□ 0.31
CNOT3-201ENST00000221232 NAA30Q147X3 362 aaPredicted RBP16.99■□□□□ 0.31
CNOT3-201ENST00000221232 KRT40Q6A162 431 aa16.99■□□□□ 0.31
CNOT3-201ENST00000221232 SPATA5Q8NB90 893 aa16.99■□□□□ 0.31
CNOT3-201ENST00000221232 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
CNOT3-201ENST00000221232 SLC26A6Q9BXS9 759 aa16.99■□□□□ 0.31
CNOT3-201ENST00000221232 ZSWIM5Q9P217 1185 aa16.99■□□□□ 0.31
CNOT3-201ENST00000221232 KIAA1468Q9P260 1216 aa16.99■□□□□ 0.31
CNOT3-201ENST00000221232 RASGRF1Q13972 1273 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 ATL3Q6DD88 541 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 APOA5Q6Q788 366 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 VPS37DQ86XT2 251 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 KCNG4Q8TDN1 519 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 NAPBQ9H115 298 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 TACC3Q9Y6A5 838 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 SH2B2O14492 632 aaPredicted RBP16.98■□□□□ 0.31
CNOT3-201ENST00000221232 SKILP12757 684 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 PFKFB1P16118 471 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 TTF1Q15361 905 aaPredicted RBP16.98■□□□□ 0.31
CNOT3-201ENST00000221232 LAMB4A4D0S4 1761 aa16.98■□□□□ 0.31
CNOT3-201ENST00000221232 GOLGA8AA7E2F4 631 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 SMIM22K7EJ46 135 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 ZBTB43O43298 467 aa16.97■□□□□ 0.31
CNOT3-201ENST00000221232 ADAMTS2O95450 1211 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms