RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SCARF1Q14162 830 aa20.09■□□□□ 0.81
USB1-201ENST00000219281 ZRSR1Q15695 479 aaKnown RBP20.09■□□□□ 0.81
USB1-201ENST00000219281 DPCR1Q3MIW9 517 aa20.09■□□□□ 0.81
USB1-201ENST00000219281 NYAP1Q6ZVC0 841 aa20.09■□□□□ 0.81
USB1-201ENST00000219281 NBPF11Q86T75 865 aa20.09■□□□□ 0.81
USB1-201ENST00000219281 MB21D2Q8IYB1 491 aaPredicted RBP20.09■□□□□ 0.81
USB1-201ENST00000219281 FBXO18Q8NFZ0 1043 aa20.09■□□□□ 0.81
USB1-201ENST00000219281 KCNG4Q8TDN1 519 aa20.09■□□□□ 0.81
USB1-201ENST00000219281 PUS7LQ9H0K6 701 aaKnown RBP20.09■□□□□ 0.81
USB1-201ENST00000219281 ZNF330Q9Y3S2 320 aaPredicted RBP20.09■□□□□ 0.81
USB1-201ENST00000219281 DHX16O60231 1041 aaKnown RBP20.08■□□□□ 0.81
USB1-201ENST00000219281 ZAP70P43403 619 aa20.08■□□□□ 0.81
USB1-201ENST00000219281 MYSM1Q5VVJ2 828 aa20.08■□□□□ 0.81
USB1-201ENST00000219281 TEX13AQ9BXU3 409 aaPredicted RBP20.08■□□□□ 0.81
USB1-201ENST00000219281 POLR3EQ9NVU0 708 aa20.08■□□□□ 0.81
USB1-201ENST00000219281 COL14A1Q05707 1796 aaKnown RBP20.08■□□□□ 0.8
USB1-201ENST00000219281 EXOC5O00471 708 aa20.07■□□□□ 0.8
USB1-201ENST00000219281 YEATS4O95619 227 aa20.07■□□□□ 0.8
USB1-201ENST00000219281 ZFYP08048 801 aaPredicted RBP20.07■□□□□ 0.8
USB1-201ENST00000219281 ANTXR2P58335 489 aa20.07■□□□□ 0.8
USB1-201ENST00000219281 AKAP2Q9Y2D5 859 aa20.07■□□□□ 0.8
USB1-201ENST00000219281 KIF28PB7ZC32 967 aa20.07■□□□□ 0.8
USB1-201ENST00000219281 CPLX1O14810 134 aa20.07■□□□□ 0.8
USB1-201ENST00000219281 CCAR2Q8N163 923 aaKnown RBP20.07■□□□□ 0.8
USB1-201ENST00000219281 NCOA7Q8NI08 942 aa20.07■□□□□ 0.8
USB1-201ENST00000219281 BCL9O00512 1426 aa20.07■□□□□ 0.8
USB1-201ENST00000219281 COL16A1Q07092 1604 aaPredicted RBP20.06■□□□□ 0.8
USB1-201ENST00000219281 BIN1O00499 593 aa20.06■□□□□ 0.8
USB1-201ENST00000219281 PI16Q6UXB8 463 aa20.06■□□□□ 0.8
USB1-201ENST00000219281 SYNE3Q6ZMZ3 975 aa20.06■□□□□ 0.8
USB1-201ENST00000219281 BRAPQ7Z569 592 aa20.06■□□□□ 0.8
USB1-201ENST00000219281 RALYLQ86SE5 291 aaKnown RBP20.06■□□□□ 0.8
USB1-201ENST00000219281 SPEF2Q9C093 1822 aa20.06■□□□□ 0.8
USB1-201ENST00000219281 GSDMDP57764 484 aa20.06■□□□□ 0.8
USB1-201ENST00000219281 APPBP2Q92624 585 aa20.06■□□□□ 0.8
USB1-201ENST00000219281 NEDD4P46934 1319 aa20.06■□□□□ 0.8
USB1-201ENST00000219281 AHDC1Q5TGY3 1603 aaPredicted RBP20.06■□□□□ 0.8
USB1-201ENST00000219281 NWD2Q9ULI1 1742 aa20.05■□□□□ 0.8
USB1-201ENST00000219281 ZNF213O14771 459 aa20.05■□□□□ 0.8
USB1-201ENST00000219281 ZNF202O95125 648 aa20.05■□□□□ 0.8
USB1-201ENST00000219281 SMC2O95347 1197 aa20.05■□□□□ 0.8
USB1-201ENST00000219281 STARD3NLO95772 234 aa20.05■□□□□ 0.8
USB1-201ENST00000219281 TRIM28Q13263 835 aaKnown RBP20.05■□□□□ 0.8
USB1-201ENST00000219281 UTP14CQ5TAP6 766 aaKnown RBP20.05■□□□□ 0.8
USB1-201ENST00000219281 FEZ1Q99689 392 aa20.05■□□□□ 0.8
USB1-201ENST00000219281 CGNQ9P2M7 1197 aaKnown RBP20.05■□□□□ 0.8
USB1-201ENST00000219281 SLC3A2P08195 630 aaKnown RBP20.05■□□□□ 0.8
USB1-201ENST00000219281 BPIFA3Q9BQP9 254 aa20.05■□□□□ 0.8
USB1-201ENST00000219281 XPO4Q9C0E2 1151 aaKnown RBP20.05■□□□□ 0.8
USB1-201ENST00000219281 OSBPL5Q9H0X9 879 aaPredicted RBP20.05■□□□□ 0.8
USB1-201ENST00000219281 IFNKQ9P0W0 207 aa20.05■□□□□ 0.8
USB1-201ENST00000219281 ITGB4P16144 1822 aa20.05■□□□□ 0.8
USB1-201ENST00000219281 KIF23Q02241 960 aaPredicted RBP20.04■□□□□ 0.8
USB1-201ENST00000219281 TAF7LQ5H9L4 462 aa20.04■□□□□ 0.8
USB1-201ENST00000219281 ANO1Q5XXA6 986 aa20.04■□□□□ 0.8
USB1-201ENST00000219281 IMPACTQ9P2X3 320 aa20.04■□□□□ 0.8
USB1-201ENST00000219281 GPAA1O43292 621 aa20.04■□□□□ 0.8
USB1-201ENST00000219281 CYP19A1P11511 503 aaPredicted RBP20.04■□□□□ 0.8
USB1-201ENST00000219281 NLRP12P59046 1061 aa20.04■□□□□ 0.8
USB1-201ENST00000219281 KAT6BQ8WYB5 2073 aa20.04■□□□□ 0.8
USB1-201ENST00000219281 COL22A1Q8NFW1 1626 aaPredicted RBP20.03■□□□□ 0.8
USB1-201ENST00000219281 ADAMTS2O95450 1211 aa20.03■□□□□ 0.8
USB1-201ENST00000219281 PFKFB1P16118 471 aa20.03■□□□□ 0.8
USB1-201ENST00000219281 HLFQ16534 295 aa20.03■□□□□ 0.8
USB1-201ENST00000219281 AXDND1Q5T1B0 1012 aaPredicted RBP20.03■□□□□ 0.8
USB1-201ENST00000219281 TMC6Q7Z403 805 aa20.03■□□□□ 0.8
USB1-201ENST00000219281 FAM89AQ96GI7 184 aa20.03■□□□□ 0.8
USB1-201ENST00000219281 ZHX1Q9UKY1 873 aaPredicted RBP20.03■□□□□ 0.8
USB1-201ENST00000219281 ZNF215Q9UL58 517 aaPredicted RBP20.03■□□□□ 0.8
USB1-201ENST00000219281 SYTL4Q96C24 671 aaPredicted RBP20.02■□□□□ 0.8
USB1-201ENST00000219281 KCND1Q9NSA2 647 aa20.02■□□□□ 0.8
USB1-201ENST00000219281 OGFRQ9NZT2 677 aa20.02■□□□□ 0.8
USB1-201ENST00000219281 TAOK2Q9UL54 1235 aa20.02■□□□□ 0.8
USB1-201ENST00000219281 DENND2AQ9ULE3 1009 aa20.02■□□□□ 0.8
USB1-201ENST00000219281 WDHD1O75717 1129 aaPredicted RBP20.02■□□□□ 0.8
USB1-201ENST00000219281 MARCKSP29966 332 aaPredicted RBP20.02■□□□□ 0.8
USB1-201ENST00000219281 ISM2Q6H9L7 571 aa20.02■□□□□ 0.8
USB1-201ENST00000219281 AIFM3Q96NN9 605 aa20.02■□□□□ 0.8
USB1-201ENST00000219281 GTPBP4Q9BZE4 634 aaKnown RBP20.02■□□□□ 0.8
USB1-201ENST00000219281 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.02■□□□□ 0.8
USB1-201ENST00000219281 V9GYY5 206 aaPredicted RBP20.02■□□□□ 0.8
USB1-201ENST00000219281 CMA1P23946 247 aa20.01■□□□□ 0.79
USB1-201ENST00000219281 GIGYF2Q6Y7W6 1299 aaKnown RBP20.01■□□□□ 0.79
USB1-201ENST00000219281 SYNE4Q8N205 404 aa20.01■□□□□ 0.79
USB1-201ENST00000219281 KIF18AQ8NI77 898 aa20.01■□□□□ 0.79
USB1-201ENST00000219281 FBXO3Q9UK99 471 aa20.01■□□□□ 0.79
USB1-201ENST00000219281 TPM4P67936 248 aa20.01■□□□□ 0.79
USB1-201ENST00000219281 IFIT5Q13325 482 aaKnown RBP20.01■□□□□ 0.79
USB1-201ENST00000219281 ARMCX5Q6P1M9 558 aa20.01■□□□□ 0.79
USB1-201ENST00000219281 KIF6Q6ZMV9 814 aa20.01■□□□□ 0.79
USB1-201ENST00000219281 MAP3K15Q6ZN16 1313 aa20.01■□□□□ 0.79
USB1-201ENST00000219281 LTBP4Q8N2S1 1624 aa20.01■□□□□ 0.79
USB1-201ENST00000219281 MROH7-TTC4A0A0A0MT08 1334 aa20■□□□□ 0.79
USB1-201ENST00000219281 NCAPHQ15003 741 aa20■□□□□ 0.79
USB1-201ENST00000219281 NKX2-3Q8TAU0 364 aa20■□□□□ 0.79
USB1-201ENST00000219281 NBPF3Q9H094 633 aa20■□□□□ 0.79
USB1-201ENST00000219281 ZBTB1Q9Y2K1 713 aa20■□□□□ 0.79
USB1-201ENST00000219281 PCCAP05165 728 aaPredicted RBP20■□□□□ 0.79
USB1-201ENST00000219281 SLC39A14Q15043 492 aa20■□□□□ 0.79
USB1-201ENST00000219281 E4F1Q66K89 784 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms