RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Sh3d21Q7TSG5 549 aa18.02■□□□□ 0.48
Ret-202ENSMUST00000088790 Cyp2ab1S4R196 498 aa18.02■□□□□ 0.48
Ret-202ENSMUST00000088790 Gm30191A0A0U1RNT7 187 aa18.02■□□□□ 0.48
Ret-202ENSMUST00000088790 Plbd2Q3TCN2 594 aa18.02■□□□□ 0.48
Ret-202ENSMUST00000088790 Fchsd1Q6PFY1 688 aa18.02■□□□□ 0.48
Ret-202ENSMUST00000088790 Naa15Q80UM3 865 aaKnown RBP18.02■□□□□ 0.48
Ret-202ENSMUST00000088790 Tacc2Q9JJG0 1149 aa18.02■□□□□ 0.48
Ret-202ENSMUST00000088790 Hmgb1P63158 215 aaKnown RBP18.02■□□□□ 0.47
Ret-202ENSMUST00000088790 Gm42641I6L9G2 585 aa18.02■□□□□ 0.47
Ret-202ENSMUST00000088790 AtripQ8BMG1 785 aa18.02■□□□□ 0.47
Ret-202ENSMUST00000088790 Abcc4E9Q236 1325 aa18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Frat1P70339 274 aa18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Pde1cQ64338 706 aa18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Wdr24Q8CFJ9 790 aa18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Tmx1Q8VBT0 278 aa18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Yeats4Q9CR11 227 aaKnown RBP18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 2310002L09RikQ9D7L5 217 aa18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Cdcp1Q5U462 833 aa18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Ppfibp1Q8C8U0 969 aaKnown RBP18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Polr2dQ9D7M8 142 aaKnown RBP18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 CltaO08585 235 aa18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Ncoa5Q91W39 579 aaKnown RBP18.01■□□□□ 0.47
Ret-202ENSMUST00000088790 Gm10378F6XQQ1 160 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Serpinb6bO08804 377 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Iqsec3Q3TES0 1195 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Q8BZJ8 459 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Gps2Q921N8 327 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Dbndd1Q9CZ00 160 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Cfap53Q9D439 514 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Cetn2Q9R1K9 172 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Uso1Q9Z1Z0 959 aaKnown RBP18■□□□□ 0.47
Ret-202ENSMUST00000088790 ParnQ8VDG3 624 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Akap2O54931 893 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Sik1Q60670 779 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Hdac6Q9Z2V5 1149 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Stox1B2RQL2 990 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Nfil3O08750 462 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Hip1rQ9JKY5 1068 aa18■□□□□ 0.47
Ret-202ENSMUST00000088790 Abcc12Q80WJ6 1366 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Pkp1P97350 728 aaKnown RBP17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Rbm43Q99J64 343 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Tab2Q99K90 693 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Lman1Q9D0F3 517 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 1700029H14RikE9PY36 240 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Bach1P97302 739 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Igbp1Q61249 340 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Dcaf5Q80T85 946 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Hexim1Q8R409 356 aaKnown RBP17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Spocd1B1ASB6 936 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Csrnp1P59054 583 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Cep63Q3UPP8 700 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Cd274Q9EP73 290 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Npc1l1Q6T3U4 1333 aa17.99■□□□□ 0.47
Ret-202ENSMUST00000088790 Ppp2r5bQ6PD28 497 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Ctage5Q8R311 779 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Kif2cQ922S8 721 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Qtrt2B8ZXI1 415 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Kif1bpQ6ZPU9 617 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Pcdhb5Q91XZ5 792 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Irx4Q9QY61 515 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Neurl4Q5NCX5 1563 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 PparaP23204 468 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Mdh1bQ5F204 500 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Zfp251Q6PCX8 632 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Ccdc105Q9D4K7 499 aa17.98■□□□□ 0.47
Ret-202ENSMUST00000088790 Setdb1O88974 1307 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 MthfslL7N466 203 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Bach2P97303 839 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Jdp2P97875 163 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Atad2Q8CDM1 1040 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Pde5aQ8CG03 865 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Lonrf3Q9D4H7 753 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Gm1993A6X8I0 212 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 SlxD3Z347 212 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Trim55G3X8Y1 545 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Arglu1Q3UL36 271 aaKnown RBP17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Kdm1aQ6ZQ88 853 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Kcnj14Q8JZN3 434 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Tbc1d2B1AVH7 922 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 RgmbQ7TQ33 436 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Ubac1Q8VDI7 409 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Bmp2kQ91Z96 1138 aa17.97■□□□□ 0.47
Ret-202ENSMUST00000088790 Oas2E9Q9A9 742 aa17.96■□□□□ 0.47
Ret-202ENSMUST00000088790 Ccdc42Q5SV66 316 aa17.96■□□□□ 0.47
Ret-202ENSMUST00000088790 Ctr9Q62018 1173 aaKnown RBP17.96■□□□□ 0.47
Ret-202ENSMUST00000088790 Nop53Q8BK35 484 aaKnown RBP17.96■□□□□ 0.47
Ret-202ENSMUST00000088790 Palm3A2TJV2 734 aa17.96■□□□□ 0.47
Ret-202ENSMUST00000088790 Gas8Q60779 478 aa17.96■□□□□ 0.47
Ret-202ENSMUST00000088790 Znf568E9PYI1 671 aa17.96■□□□□ 0.47
Ret-202ENSMUST00000088790 Nlrp2Q4PLS0 1046 aaKnown RBP17.96■□□□□ 0.47
Ret-202ENSMUST00000088790 Prpf40aQ9R1C7 953 aaKnown RBP17.96■□□□□ 0.47
Ret-202ENSMUST00000088790 Hdhd2Q3UGR5 259 aa17.96■□□□□ 0.46
Ret-202ENSMUST00000088790 Bbof1Q3V079 533 aa17.96■□□□□ 0.46
Ret-202ENSMUST00000088790 Ccdc7Q9D541 371 aa17.96■□□□□ 0.46
Ret-202ENSMUST00000088790 Gm20425E9Q035 978 aaKnown RBP17.95■□□□□ 0.46
Ret-202ENSMUST00000088790 SrprbP47758 269 aa17.95■□□□□ 0.46
Ret-202ENSMUST00000088790 Krt15Q61414 452 aa17.95■□□□□ 0.46
Ret-202ENSMUST00000088790 Calml3Q9D6P8 149 aa17.95■□□□□ 0.46
Ret-202ENSMUST00000088790 Ube3aO08759 870 aa17.95■□□□□ 0.46
Ret-202ENSMUST00000088790 Tmtc2Q56A06 836 aa17.95■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms