RNA–Protein interactions for RNA: ENST00000639483.1

KCNMA1-260, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-260ENST00000639483 RND3P61587 244 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 ERHP84090 104 aaKnown RBP13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 GCSAMQ8N6F7 178 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 TMEM204Q9BSN7 226 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 ZDHHC8Q9ULC8 765 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 ZNF737O75373 536 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 IGHV3-48P01763 117 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 RPL30P62888 115 aaKnown RBP13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 TBR1Q16650 682 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 COQ2Q96H96 371 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 SLC35E1Q96K37 410 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 DCAF16Q9NXF7 216 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 GAB2Q9UQC2 676 aa13.56□□□□□ -0.24
KCNMA1-260ENST00000639483 RTP5Q14D33 572 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 COMMD1Q8N668 190 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 CYB561D1Q8N8Q1 229 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 FAM215AQ9Y5M1 114 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 A0A1W2PPH5 198 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 IFNL4K9M1U5 179 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 DANCRP0C864 163 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 PCSK4Q6UW60 755 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 LDLRAD3Q86YD5 345 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 QTRT1Q9BXR0 403 aaKnown RBP13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 HPRT1P00492 218 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 ERVFRD-1P60508 538 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 CRIP3Q6Q6R5 217 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 TMEM140Q9NV12 185 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 IGHV3-21A0A0B4J1V1 117 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 FAM157AC9JC47 383 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 IGHV1-46P01743 117 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 LY6DQ14210 128 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 ZNF273Q14593 569 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 ZNF714Q96N38 554 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 RPRMQ9NS64 109 aa13.55□□□□□ -0.24
KCNMA1-260ENST00000639483 CDC34P49427 236 aaPredicted RBP13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 ZNF66Q6ZN08 573 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 Q6ZRM9 215 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 RPEQ96AT9 228 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 USB1Q9BQ65 265 aaKnown RBP13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 K7N7A8 449 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 TIMP3P35625 211 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 TGIF2LYQ8IUE0 185 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 TGIF2LXQ8IUE1 241 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 IL22RA2Q969J5 263 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 CDK2AP1O14519 115 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 OPRK1P41145 380 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 NUBP1P53384 320 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 NDUFA6P56556 154 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 ZNF355PQ9NSJ1 428 aa13.54□□□□□ -0.24
KCNMA1-260ENST00000639483 BTBD17A6NE02 478 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 J3QR06 171 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 MRGPRGQ86SM5 289 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 FAM90A1Q86YD7 464 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 TVP23CQ96ET8 276 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 LURAP1Q96LR2 239 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 REG4Q9BYZ8 158 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 LPAR2Q9HBW0 351 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 JPT1Q9UK76 154 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 SRRM5B3KS81 715 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 MBP02144 154 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 LILRB1Q8NHL6 650 aaPredicted RBP13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 TAF15Q92804 592 aaKnown RBP eCLIP13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 NEUROG1Q92886 237 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 LSM10Q969L4 123 aaKnown RBP13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 COL25A1Q9BXS0 654 aaPredicted RBP13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 DKK4Q9UBT3 224 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 H7BYZ3 331 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 NPY1RP25929 384 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 ID3Q02535 119 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 MISP3Q96FF7 219 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 SLX1AQ9BQ83 275 aa13.53□□□□□ -0.24
KCNMA1-260ENST00000639483 C17orf100A8MU93 164 aa13.52□□□□□ -0.24
KCNMA1-260ENST00000639483 LRTM2Q8N967 370 aa13.52□□□□□ -0.24
KCNMA1-260ENST00000639483 IL19Q9UHD0 177 aa13.52□□□□□ -0.24
KCNMA1-260ENST00000639483 ARFGEF3Q5TH69 2177 aa13.52□□□□□ -0.24
KCNMA1-260ENST00000639483 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 IGKV1-5P01602 117 aa13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 TMEM171Q8WVE6 324 aa13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 THBS3P49746 956 aa13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 UCNP55089 124 aa13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 SRSF4Q08170 494 aaKnown RBP13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 DUX4L9Q6RFH8 374 aaPredicted RBP13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 MUC15Q8N387 334 aa13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 UBTD1Q9HAC8 227 aa13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 IDI2-AS1Q9NZ38 188 aa13.52□□□□□ -0.25
KCNMA1-260ENST00000639483 IGKV1D-17A0A075B6S4 117 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 H3BQ15 152 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 TM4SF5O14894 197 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 PAGE4O60829 102 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 MT-ND4LP03901 98 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 MGST1P10620 155 aaKnown RBP13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 FLYWCH2Q96CP2 140 aaKnown RBP13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 WFIKKN1Q96NZ8 548 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 CABLES2Q9BTV7 478 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 USP34Q70CQ2 3546 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 A0A1W2PPQ1 181 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 CHRNB4P30926 498 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 NMSQ5H8A3 153 aa13.51□□□□□ -0.25
KCNMA1-260ENST00000639483 OR13D1Q8NGV5 346 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms