RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 AKIRIN2Q53H80 203 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 C10orf55Q5SWW7 151 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 SFXN4Q6P4A7 337 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 SLC25A38Q96DW6 304 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 RHOVQ96L33 236 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 RNF5Q99942 180 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 GHITMQ9H3K2 345 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 ZNF355PQ9NSJ1 428 aa12.6□□□□□ -0.39
COLCA2-207ENST00000639470 ZNF256Q9Y2P7 627 aaPredicted RBP12.6□□□□□ -0.39
COLCA2-207ENST00000639470 ANKRD34BA5PLL1 514 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 METTL21EPA6NDL7 271 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 SHOXO15266 292 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 RAMP3O60896 148 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 CRYZL1O95825 349 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 TRBV12-3P01733 135 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 SPNP16150 400 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 GALP22466 123 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 DUTP33316 252 aaKnown RBP12.59□□□□□ -0.39
COLCA2-207ENST00000639470 ZNF773Q6PK81 442 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 CENPOQ9BU64 300 aa12.59□□□□□ -0.39
COLCA2-207ENST00000639470 LOC100506127A0A0U1RQW1 187 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 CNIH1O95406 144 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 IGLV2-14P01704 120 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 PRH1P02810 166 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 TMEM267Q0VDI3 215 aaPredicted RBP12.58□□□□□ -0.4
COLCA2-207ENST00000639470 TMEM177Q53S58 311 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 HACD4Q5VWC8 232 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 C19orf35Q6ZS72 473 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 OVCH2Q7RTZ1 564 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 VKORC1L1Q8N0U8 176 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 TCTEX1D1Q8N7M0 179 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 POC5Q8NA72 575 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 SSR3Q9UNL2 185 aa12.58□□□□□ -0.4
COLCA2-207ENST00000639470 MRPS14O60783 128 aaKnown RBP12.57□□□□□ -0.4
COLCA2-207ENST00000639470 DTYMKP23919 212 aa12.57□□□□□ -0.4
COLCA2-207ENST00000639470 Q6ZS49 121 aa12.57□□□□□ -0.4
COLCA2-207ENST00000639470 GVQW1Q8N7I0 195 aa12.57□□□□□ -0.4
COLCA2-207ENST00000639470 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.57□□□□□ -0.4
COLCA2-207ENST00000639470 MSGN1A6NI15 193 aa12.56□□□□□ -0.4
COLCA2-207ENST00000639470 TRIM64CA6NLI5 447 aa12.56□□□□□ -0.4
COLCA2-207ENST00000639470 HSPB1P04792 205 aaKnown RBP12.56□□□□□ -0.4
COLCA2-207ENST00000639470 BRWD1-AS2P59051 145 aa12.56□□□□□ -0.4
COLCA2-207ENST00000639470 TNXAQ16473 311 aa12.56□□□□□ -0.4
COLCA2-207ENST00000639470 IDNKQ5T6J7 187 aa12.56□□□□□ -0.4
COLCA2-207ENST00000639470 ACSM6Q6P461 480 aa12.56□□□□□ -0.4
COLCA2-207ENST00000639470 FCGR1BQ92637 280 aa12.56□□□□□ -0.4
COLCA2-207ENST00000639470 RHBDL2Q9NX52 303 aa12.56□□□□□ -0.4
COLCA2-207ENST00000639470 FCGR3BO75015 233 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 TUSC2O75896 110 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 SAA1P0DJI8 122 aaPredicted RBP12.55□□□□□ -0.4
COLCA2-207ENST00000639470 LGALS7P47929 136 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 GNG2P59768 71 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 DYRK1AQ13627 763 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 PRSS8Q16651 343 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 RTL8BQ17RB0 113 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 PYHIN1Q6K0P9 492 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 Q9H521 79 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 ZNF430Q9H8G1 570 aaPredicted RBP12.55□□□□□ -0.4
COLCA2-207ENST00000639470 COA4Q9NYJ1 87 aa12.55□□□□□ -0.4
COLCA2-207ENST00000639470 TRAV18A0A075B6X5 111 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 MEIS3P1A6NDR6 274 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 DIRAS3O95661 229 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 MYOD1P15172 320 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 CD36P16671 472 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 UBE2KP61086 200 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 EIF4EBP1Q13541 118 aaPredicted RBP12.54□□□□□ -0.4
COLCA2-207ENST00000639470 SRSF7Q16629 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
COLCA2-207ENST00000639470 ZNF429Q86V71 674 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 TPRA1Q86W33 373 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 SBSPONQ8IVN8 264 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 ZNF645Q8N7E2 425 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 ACOT12Q8WYK0 555 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 RSRP1Q9BUV0 290 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 YTHDF1Q9BYJ9 559 aaKnown RBP12.54□□□□□ -0.4
COLCA2-207ENST00000639470 SLA2Q9H6Q3 261 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 SPATA2Q9UM82 520 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 RBMX2Q9Y388 322 aaKnown RBP12.54□□□□□ -0.4
COLCA2-207ENST00000639470 OR2W1Q9Y3N9 320 aa12.54□□□□□ -0.4
COLCA2-207ENST00000639470 A0A1B0GW64 132 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 HMX3A6NHT5 357 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 TNFSF12O43508 249 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 HLA-DQB1P01920 261 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 GP9P14770 177 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 PITPNAQ00169 270 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 ZNF45Q02386 682 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 KCTD9Q7L273 389 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 ADAD2Q8NCV1 583 aaKnown RBP12.53□□□□□ -0.4
COLCA2-207ENST00000639470 SRSF12Q8WXF0 261 aaKnown RBP12.53□□□□□ -0.4
COLCA2-207ENST00000639470 PHB2Q99623 299 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 DCUN1D5Q9BTE7 237 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 TINAGL1Q9GZM7 467 aaPredicted RBP12.53□□□□□ -0.4
COLCA2-207ENST00000639470 TAS2R8Q9NYW2 309 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 ANXA10Q9UJ72 324 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 U3KQK5 164 aa12.53□□□□□ -0.4
COLCA2-207ENST00000639470 C13orf42A0A1B0GVH6 325 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 E7EUB6 86 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 AADACP22760 399 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 RANBP1P43487 201 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 INSL3P51460 131 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms