RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 RPA2P15927 270 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 CATR1Q13166 79 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 DHRS2Q13268 280 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 HES1Q14469 280 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 LRRC75BQ2VPJ9 315 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 TRIM16LQ309B1 348 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 SGPP2Q8IWX5 399 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 CASTOR1Q8WTX7 329 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 GLYATL2Q8WU03 294 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 LIN7CQ9NUP9 197 aaKnown RBP13.3□□□□□ -0.28
CCNA1-203ENST00000625767 WASHC3Q9Y3C0 194 aa13.3□□□□□ -0.28
CCNA1-203ENST00000625767 TNCP24821 2201 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 C9orf170A2RU37 121 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 SRRM4A7MD48 611 aaKnown RBP13.29□□□□□ -0.28
CCNA1-203ENST00000625767 VGLL3A8MV65 326 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 H0Y980 276 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 HOXA3O43365 443 aaPredicted RBP13.29□□□□□ -0.28
CCNA1-203ENST00000625767 HLA-AP01891 365 aaKnown RBP13.29□□□□□ -0.28
CCNA1-203ENST00000625767 APOA2P02652 100 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 CD1BP29016 333 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 S100GP29377 79 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 MECP2P51608 486 aaKnown RBP13.29□□□□□ -0.28
CCNA1-203ENST00000625767 ANKRD55Q3KP44 614 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 C4orf46Q504U0 113 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 LIN54Q6MZP7 749 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 Q6YL49 198 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 VKORC1L1Q8N0U8 176 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 ZDHHC16Q969W1 377 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 ADTRPQ96IZ2 230 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 EAF1Q96JC9 268 aaPredicted RBP13.29□□□□□ -0.28
CCNA1-203ENST00000625767 PRELID3BQ9Y3B1 194 aa13.29□□□□□ -0.28
CCNA1-203ENST00000625767 SETD2Q9BYW2 2564 aaPredicted RBP13.29□□□□□ -0.28
CCNA1-203ENST00000625767 RNF212BA8MTL3 300 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 CRLF1O75462 422 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 LPAR6P43657 344 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 IER3P46695 156 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 F2RL1P55085 397 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 TAS2R31P59538 309 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 TMEM187Q14656 261 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 PRDM13Q9H4Q3 707 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 ESM1Q9NQ30 184 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 SFT2D2O95562 160 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 RTL8BQ17RB0 113 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 LYG2Q86SG7 212 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 PDPNQ86YL7 162 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 GALNT14Q96FL9 552 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 TMEM222Q9H0R3 208 aa13.28□□□□□ -0.28
CCNA1-203ENST00000625767 IFNA2P01563 188 aa13.27□□□□□ -0.29
CCNA1-203ENST00000625767 UCP1P25874 307 aa13.27□□□□□ -0.29
CCNA1-203ENST00000625767 BRS3P32247 399 aa13.27□□□□□ -0.29
CCNA1-203ENST00000625767 MC5RP33032 325 aa13.27□□□□□ -0.29
CCNA1-203ENST00000625767 DYNLT3P51808 116 aa13.27□□□□□ -0.29
CCNA1-203ENST00000625767 SSX9Q7RTT3 188 aa13.27□□□□□ -0.29
CCNA1-203ENST00000625767 Q8N6K4 173 aa13.27□□□□□ -0.29
CCNA1-203ENST00000625767 ALX4Q9H161 411 aaPredicted RBP13.27□□□□□ -0.29
CCNA1-203ENST00000625767 TPSG1Q9NRR2 321 aa13.27□□□□□ -0.29
CCNA1-203ENST00000625767 TET2Q6N021 2002 aaPredicted RBP13.27□□□□□ -0.29
CCNA1-203ENST00000625767 CHST1O43916 411 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 MOSP00540 346 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 IGLV2-23P01705 113 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 TMEM11P17152 192 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 ARHGDIBP52566 201 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 RPS16P62249 146 aaKnown RBP13.26□□□□□ -0.29
CCNA1-203ENST00000625767 EBI3Q14213 229 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 TATDN3Q17R31 274 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 IZUMO4Q1ZYL8 232 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 TMEM177Q53S58 311 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 OR4S2Q8NH73 311 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 FLYWCH2Q96CP2 140 aaKnown RBP13.26□□□□□ -0.29
CCNA1-203ENST00000625767 HARBI1Q96MB7 349 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 TCF19Q9Y242 345 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 JMJD1CQ15652 2540 aa13.26□□□□□ -0.29
CCNA1-203ENST00000625767 A0A0A6YYJ9 748 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 A0A0G2JRQ6 117 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 SHOXO15266 292 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 KRASP01116 189 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 G6PCP35575 357 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 SRSF2Q01130 221 aaKnown RBP13.25□□□□□ -0.29
CCNA1-203ENST00000625767 TAGLNQ01995 201 aaKnown RBP13.25□□□□□ -0.29
CCNA1-203ENST00000625767 CBX3Q13185 183 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 LIAT1Q6ZQX7 453 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 SELENOHQ8IZQ5 122 aaKnown RBP13.25□□□□□ -0.29
CCNA1-203ENST00000625767 OR4C13Q8NGP0 309 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 OR2T10Q8NGZ9 312 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 PLSCR3Q9NRY6 295 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 KCNIP3Q9Y2W7 256 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 ALG5Q9Y673 324 aa13.25□□□□□ -0.29
CCNA1-203ENST00000625767 A6NDX4 124 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 DNAJC9-AS1A6NH13 148 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 SH2D7A6NKC9 451 aaPredicted RBP13.24□□□□□ -0.29
CCNA1-203ENST00000625767 RBFOX2O43251 390 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCNA1-203ENST00000625767 CDS2O95674 445 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 HPRT1P00492 218 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 IGKV1-5P01602 117 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 IL5P05113 134 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 SERPINE2P07093 398 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 FAM157CP0CG43 387 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 FAM106CPP0CH98 169 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 KIR2DS2P43631 304 aa13.24□□□□□ -0.29
CCNA1-203ENST00000625767 RAG2P55895 527 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms