RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FAM90A9PA6NNJ1 464 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 VSTM5A8MXK1 200 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 ATXN7O15265 892 aaPredicted RBP16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 CCL20P78556 96 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 TLE4Q04727 773 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 SLC38A11Q08AI6 406 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 CT45A1Q5HYN5 189 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 ZCCHC24Q8N2G6 241 aaKnown RBP16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 CT45A3Q8NHU0 189 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 OR4C12Q96R67 309 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 RSG1Q9BU20 258 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 BIN3Q9NQY0 253 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 PIEZO1Q92508 2521 aa16.28■□□□□ 0.2
PCDHB11-202ENST00000624887 ZNF729A6NN14 1252 aaPredicted RBP16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 ZG16O60844 167 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 TLE1Q04724 770 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 KLRB1Q12918 225 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 AARDQ4LEZ3 155 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 UTF1Q5T230 341 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 TMEM88Q6PEY1 159 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 LEAP2Q969E1 77 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 WDR61Q9GZS3 305 aaKnown RBP16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 EGLN1Q9GZT9 426 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 KIAA1456Q9P272 454 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 IGF2RP11717 2491 aa16.27■□□□□ 0.2
PCDHB11-202ENST00000624887 RBMXL2O75526 392 aaKnown RBP16.27■□□□□ 0.19
PCDHB11-202ENST00000624887 KIR2DS2P43631 304 aa16.27■□□□□ 0.19
PCDHB11-202ENST00000624887 TMEM30BQ3MIR4 351 aa16.27■□□□□ 0.19
PCDHB11-202ENST00000624887 DDB2Q92466 427 aa16.27■□□□□ 0.19
PCDHB11-202ENST00000624887 ZDHHC16Q969W1 377 aa16.27■□□□□ 0.19
PCDHB11-202ENST00000624887 S1PR3Q99500 378 aa16.27■□□□□ 0.19
PCDHB11-202ENST00000624887 SAP30LQ9HAJ7 183 aa16.27■□□□□ 0.19
PCDHB11-202ENST00000624887 IDI2-AS1Q9NZ38 188 aa16.27■□□□□ 0.19
PCDHB11-202ENST00000624887 TRAV38-1A0A0B4J264 116 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 TRGV8A0A0C4DH27 118 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 NKX6-3A6NJ46 265 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 PCP4L1A6NKN8 68 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 SHISA9B4DS77 424 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 OR9G9P0C7N8 305 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 SERF2P84101 59 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 NCMAPQ5T1S8 102 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 OR8G2PQ6IF36 304 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 C1orf229Q6ZS94 237 aaPredicted RBP16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 FAM122AQ96E09 287 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 SLC35B3Q9H1N7 401 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 RBFOX3A6NFN3 312 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 PMS2P5A8MQ11 134 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 TMPRSS2O15393 492 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 HBE1P02100 147 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 IFNA4P05014 189 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 ATP6V1FQ16864 119 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 CBLN2Q8IUK8 224 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 C1orf87Q8N0U7 546 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 ZNF439Q8NDP4 499 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 SFT2D1Q8WV19 159 aa16.26■□□□□ 0.19
PCDHB11-202ENST00000624887 HCFC1P51610 2035 aa16.25■□□□□ 0.19
PCDHB11-202ENST00000624887 CEBPZOSA8MTT3 80 aa16.25■□□□□ 0.19
PCDHB11-202ENST00000624887 DMRTC2Q8IXT2 367 aaPredicted RBP16.25■□□□□ 0.19
PCDHB11-202ENST00000624887 TAF15Q92804 592 aaKnown RBP eCLIP16.25■□□□□ 0.19
PCDHB11-202ENST00000624887 RARRES2Q99969 163 aa16.25■□□□□ 0.19
PCDHB11-202ENST00000624887 QTRT1Q9BXR0 403 aaKnown RBP16.25■□□□□ 0.19
PCDHB11-202ENST00000624887 PRORYQ9H606 182 aa16.25■□□□□ 0.19
PCDHB11-202ENST00000624887 SAA2-SAA4A0A096LPE2 208 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 TRAV1-1A0A0B4J248 108 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 A0A1W2PPE3 182 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 hADV38S2A0JD32 116 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 TMEM178BH3BS89 294 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 SAA2P0DJI9 122 aaPredicted RBP16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 NQO2P16083 231 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 NFYBP25208 207 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 CASP6P55212 293 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 RAB2AP61019 212 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 PRAMEF5Q5TYX0 476 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 RNASE6Q93091 150 aaKnown RBP16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 RBMXL1Q96E39 390 aaKnown RBP16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 C12orf57Q99622 126 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 ZNF251Q9BRH9 671 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 RPRMQ9NS64 109 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 LINC00312Q9Y6C7 94 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 DOCK11Q5JSL3 2073 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 UBE2L5PA0A1B0GUS4 154 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 E7EQL1 145 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 PAX6P26367 422 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 ERVK-16P61578 105 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 OR10P1Q8NGE3 313 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 OR4S2Q8NH73 311 aa16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 PINX1Q96BK5 328 aaKnown RBP16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 RPUSD1Q9UJJ7 312 aaKnown RBP16.24■□□□□ 0.19
PCDHB11-202ENST00000624887 LY86O95711 162 aa16.23■□□□□ 0.19
PCDHB11-202ENST00000624887 NDUFB7P17568 137 aa16.23■□□□□ 0.19
PCDHB11-202ENST00000624887 KDF1Q8NAX2 398 aaPredicted RBP16.23■□□□□ 0.19
PCDHB11-202ENST00000624887 TMEM147Q9BVK8 224 aa16.23■□□□□ 0.19
PCDHB11-202ENST00000624887 SLC25A10Q9UBX3 287 aaPredicted RBP16.23■□□□□ 0.19
PCDHB11-202ENST00000624887 TIMM9Q9Y5J7 89 aa16.23■□□□□ 0.19
PCDHB11-202ENST00000624887 PPIAL4EA0A075B759 164 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 PPIAL4DF5H284 164 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 MMP23AO75900 390 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 PPIAL4FP0DN26 164 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 CA7P43166 264 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms