RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TOX4O94842 621 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SCAF4O95104 1147 aaKnown RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 DIRAS3O95661 229 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 LY86O95711 162 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 MBPP02686 304 aaPredicted RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 TK1P04183 234 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 CD5P06127 495 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 RNASE1P07998 156 aaKnown RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 OR5H8P0DN80 308 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 IGHV4-38-2P0DP08 117 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SLC25A6P12236 298 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SERPINA2P20848 420 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 FUT3P21217 361 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 LMO1P25800 156 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 RPL12P30050 165 aaKnown RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 GLP1RP43220 463 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 KIR2DS4P43632 304 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 KCNJ3P48549 501 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 UBE2E1P51965 193 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 RBM11P57052 281 aaKnown RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 RND3P61587 244 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 ARF6P62330 175 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF266Q14584 549 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 KIR2DS1Q14954 304 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 TAF9Q16594 264 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 LRRC37A5PQ49AS3 106 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 ABCA11PQ4W5N1 156 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 PLAC9Q5JTB6 97 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 UTF1Q5T230 341 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 OR52W1Q6IF63 320 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 HCP5Q6MZN7 132 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 Q6ZPA2 131 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 C5orf24Q7Z6I8 188 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 LDLRAD3Q86YD5 345 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 GVQW1Q8N7I0 195 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 ADAD2Q8NCV1 583 aaKnown RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 OR1S2Q8NGQ3 325 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 OR5R1Q8NH85 324 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SGMS2Q8NHU3 365 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 PLPPR1Q8TBJ4 325 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 NUDCD2Q8WVJ2 157 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 IL22RA2Q969J5 263 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 MRGPRFQ96AM1 343 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 COQ2Q96H96 371 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 ARHGAP5-AS1Q96IT6 56 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 Q96M66 194 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 CMSS1Q9BQ75 279 aaKnown RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 NICN1Q9BSH3 213 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SLC25A31Q9H0C2 315 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SIRPDQ9H106 197 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF286AQ9HBT8 521 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 EHFQ9NZC4 300 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 RCC2Q9P258 522 aaKnown RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SLC25A10Q9UBX3 287 aaPredicted RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 RNF150Q9ULK6 438 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 MMP24Q9Y5R2 645 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 HSPB6O14558 160 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 DEGS1O15121 323 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 HMGB3O15347 200 aaKnown RBP4.28□□□□□ -1.72
SHMT1-211ENST00000618902 TGOLN2O43493 480 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 GPR137BO60478 399 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 FBXO24O75426 580 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 SCO1O75880 301 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 MMP23AO75900 390 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 MT-ND4LP03901 98 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 S100A8P05109 93 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 CSN2P05814 226 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 FCGR3AP08637 254 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 FBP1P09467 338 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF728P0DKX0 622 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 CGB3P0DN86 165 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 CGB7P0DN87 165 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 HKR1P10072 659 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 CCL3L1P16619 93 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 NDUFB7P17568 137 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 GABRR1P24046 479 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 MAS1LP35410 378 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 TAGLN2P37802 199 aaKnown RBP4.28□□□□□ -1.72
SHMT1-211ENST00000618902 GLIPR1P48060 266 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 RAB13P51153 203 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 ARHGDIBP52566 201 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 SUPT4H1P63272 117 aaKnown RBP4.28□□□□□ -1.72
SHMT1-211ENST00000618902 BAXQ07812 192 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 KLRD1Q13241 179 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 EDDM3AQ14507 147 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 MPV17LQ2QL34 196 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 IAH1Q2TAA2 248 aaPredicted RBP4.28□□□□□ -1.72
SHMT1-211ENST00000618902 LDLRAD2Q5SZI1 272 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 TMEM200BQ69YZ2 307 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 BTNL8Q6UX41 500 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 BCL6BQ8N143 479 aaPredicted RBP4.28□□□□□ -1.72
SHMT1-211ENST00000618902 OSR2Q8N2R0 312 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 PNKDQ8N490 385 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 SUMF2Q8NBJ7 301 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 RTN4IP1Q8WWV3 396 aaPredicted RBP4.28□□□□□ -1.72
SHMT1-211ENST00000618902 H1FXQ92522 213 aaKnown RBP4.28□□□□□ -1.72
SHMT1-211ENST00000618902 DYRK2Q92630 601 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 TNFRSF14Q92956 283 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 TMEM230Q96A57 120 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 GNPNAT1Q96EK6 184 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms