RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CEBPDP49716 269 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 FAM180AQ6UWF9 173 aa14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 ZNF818PQ6ZRF7 136 aa14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 CISD2Q8N5K1 135 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 SPIN2AQ99865 258 aa14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 SPIN2BQ9BPZ2 258 aa14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 SCNM1Q9BWG6 230 aa14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 SLC25A15Q9Y619 301 aa14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 YLPM1P49750 1951 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-205ENST00000594973 SLC33A1O00400 549 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 WNT9BO14905 357 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 MPPED1O15442 326 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 GALR1P47211 349 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 DYNLT3P51808 116 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 PRAMEF6Q5VXH4 476 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 GAPTQ8N292 157 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 UBALD1Q8TB05 177 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 MBD3L1Q8WWY6 194 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 CADP27708 2225 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 HEATR1Q9H583 2144 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 ZNF718Q3SXZ3 478 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 WDR25Q64LD2 544 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 Q6ZR03 302 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 CYP2G1PQ6ZSU1 146 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 PLPPR1Q8TBJ4 325 aa14.32□□□□□ -0.12
SHKBP1-205ENST00000594973 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 C3orf85A0A1B0GTC6 90 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 M0R1B8 84 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 SIAH2O43255 324 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 TNFSF12O43508 249 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 HRASP01112 189 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 GZMHP20718 246 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 TBC1D26Q86UD7 250 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 TMEM37Q8WXS4 190 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 H7BYZ3 331 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 CD55P08174 381 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 CTXN2P0C2S0 81 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 OMGP23515 440 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 CNN1P51911 297 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 COL5A1-AS1Q5SY13 56 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 ZNF787Q6DD87 383 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 PCSK4Q6UW60 755 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 ATP5SQ99766 215 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 CCL28Q9NRJ3 127 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 OR6C3Q9NZP0 311 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 DUSP13Q9UII6 198 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 FUT9Q9Y231 359 aa14.31□□□□□ -0.12
SHKBP1-205ENST00000594973 A0A1W2PPQ1 181 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 ZFP92A6NM28 416 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 SH2D1BO14796 132 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 BMP5P22003 454 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 RBX1P62877 108 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 RUNX1Q01196 453 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 MRGPRGQ86SM5 289 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 SPACA3Q8IXA5 215 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 C11orf53Q8IXP5 236 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 C22orf15Q8WYQ4 148 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 TRAPPC2LQ9UL33 140 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 RNF150Q9ULK6 438 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 ADGRG4Q8IZF6 3080 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 TUSC2O75896 110 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 IFNA1P01562 189 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 TFF1P04155 84 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 TUBG1P23258 451 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 RPP30P78346 268 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 ZNF146Q15072 292 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 FAM57AQ8TBR7 257 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 ZCCHC14Q8WYQ9 949 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 TBX15Q96SF7 602 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 CXXC4Q9H2H0 198 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 OR1A1Q9P1Q5 309 aa14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 UBE2J1Q9Y385 318 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-205ENST00000594973 TRBV6-6A0A0A6YYG2 114 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 MAP1LC3B2A6NCE7 125 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 TCF21O43680 179 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 HAND1O96004 215 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 KITLGP21583 273 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 OR5I1Q13606 314 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 ADIRFQ15847 76 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 BSXQ3C1V8 233 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 KRTCAP3Q53RY4 240 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 ANAPC16Q96DE5 110 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 MS4A10Q96PG2 267 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 PCGF1Q9BSM1 259 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 MAP1LC3BQ9GZQ8 125 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 NKX2-6A6NCS4 301 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 ZNF705FA8MVS1 300 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 ZNF705DP0CH99 300 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 ZNF705BP0CI00 300 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 TIMP3P35625 211 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 SRP14P37108 136 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 GNB2P62879 340 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 ZNF497Q6ZNH5 498 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 TEX43Q6ZNM6 134 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 LRP11Q86VZ4 500 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 ODF3L1Q8IXM7 274 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 ZNF665Q9H7R5 613 aa14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 ERRFI1Q9UJM3 462 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-205ENST00000594973 PSPNO60542 156 aa14.28□□□□□ -0.12
SHKBP1-205ENST00000594973 MDH2P40926 338 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms