RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 MIDNQ504T8 468 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 CXorf66Q5JRM2 361 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-205ENST00000588745 DHRS7BQ6IAN0 325 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-205ENST00000588745 Q6ZRM9 215 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 C1orf122Q6ZSJ8 110 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 H2BFWTQ7Z2G1 175 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 TGIF2LXQ8IUE1 241 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 PNKDQ8N490 385 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 OR13D1Q8NGV5 346 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 AQP10Q96PS8 301 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 NABP2Q9BQ15 211 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 SIRT7Q9NRC8 400 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 SLC35D1Q9NTN3 355 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 AMMECR1Q9Y4X0 333 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-205ENST00000588745 KPTNQ9Y664 436 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 TENM4Q6N022 2769 aa9.28□□□□□ -0.92
SMAD4-205ENST00000588745 IGHV4-30-2A0A087WSY4 118 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 MSGN1A6NI15 193 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 WRBO00258 174 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 BCL2L11O43521 198 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 CRYZL1O95825 349 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 RRASP10301 218 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 NQO2P16083 231 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 REG1BP48304 166 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 KRTAP10-9P60411 292 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 ERVK-16P61578 105 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 POLR2GP62487 172 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMAD4-205ENST00000588745 TAGLNQ01995 201 aaKnown RBP9.27□□□□□ -0.93
SMAD4-205ENST00000588745 PRB3Q04118 309 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-205ENST00000588745 DIAPH2-AS1Q14236 149 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 RTL8BQ17RB0 113 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 DMBX1Q8NFW5 382 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 OR5AN1Q8NGI8 311 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 OR4P4Q8NGL7 312 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 PCGF1Q9BSM1 259 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 C11orf1Q9H5F2 150 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 HEXA-AS1Q9H8Q6 139 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 UNKLQ9H9P5 680 aaKnown RBP9.27□□□□□ -0.93
SMAD4-205ENST00000588745 ARID1AO14497 2285 aa9.27□□□□□ -0.93
SMAD4-205ENST00000588745 KANTRA0A1W2PQU2 76 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 FAM90A9PA6NNJ1 464 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 ODF3BA8MYP8 253 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 FAM157AC9JC47 383 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 FAM90A26D6RGX4 464 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 H0YJW9 148 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 BUB1B-PAK6H3BSN5 160 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 TXNL1O43396 289 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 KCNAB3O43448 404 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 SSSCA1O60232 199 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 NXPH3O95157 252 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 HKR1P10072 659 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 MMP9P14780 707 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 PVALBP20472 110 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-205ENST00000588745 P2RY1P47900 373 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 ARHGDIBP52566 201 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 VMO1Q7Z5L0 202 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 OR11H6Q8NGC7 330 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 MARVELD3Q96A59 401 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 PSMG3-AS1Q96PY0 264 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 MAGT1Q9H0U3 335 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 SIRPDQ9H106 197 aa9.26□□□□□ -0.93
SMAD4-205ENST00000588745 POLR3KQ9Y2Y1 108 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-205ENST00000588745 OR9G9P0C7N8 305 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 SLC25A16P16260 332 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 RPL12P30050 165 aaKnown RBP9.25□□□□□ -0.93
SMAD4-205ENST00000588745 VAMP2P63027 116 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 KLRD1Q13241 179 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 POU2AF1Q16633 256 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 CLEC12BQ2HXU8 276 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 TMEM177Q53S58 311 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 HCP5Q6MZN7 132 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 SSX9Q7RTT3 188 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 PDPNQ86YL7 162 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 ARPC5LQ9BPX5 153 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 MMP26Q9NRE1 261 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-205ENST00000588745 TMEM140Q9NV12 185 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 BEX4Q9NWD9 120 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-205ENST00000588745 FBN2P35556 2912 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 ARHGAP32A7KAX9 2087 aa9.25□□□□□ -0.93
SMAD4-205ENST00000588745 H7C2Y5 167 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 SYNGR2O43760 224 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 GPR137BO60478 399 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 HRASP01112 189 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 IGKV1-16P04430 117 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 ARG1P05089 322 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 HOXB4P17483 251 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-205ENST00000588745 RAB13P51153 203 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 DVL1P1P54792 670 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-205ENST00000588745 AARDQ4LEZ3 155 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 SLC51BQ86UW2 128 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 VKORC1L1Q8N0U8 176 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 LRRC75A-AS1Q8N1F1 130 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 OSR1Q8TAX0 266 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-205ENST00000588745 RPEQ96AT9 228 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 RHOVQ96L33 236 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 RAB40CQ96S21 281 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 LYRM2Q9NU23 88 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-205ENST00000588745 HSPB7Q9UBY9 170 aa9.24□□□□□ -0.93
SMAD4-205ENST00000588745 WASHC3Q9Y3C0 194 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms