RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 LINC01551Q86U37 167 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 TGIF2LXQ8IUE1 241 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 CISD2Q8N5K1 135 aaKnown RBP14.6□□□□□ -0.07
SCARF1-205ENST00000571272 ZBTB34Q8NCN2 500 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 SDSLQ96GA7 329 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 C2orf88Q9BSF0 95 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 PATZ1Q9HBE1 687 aaKnown RBP14.6□□□□□ -0.07
SCARF1-205ENST00000571272 FOXJ2Q9P0K8 574 aa14.6□□□□□ -0.07
SCARF1-205ENST00000571272 CLDN14O95500 239 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 MEOX1P50221 254 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 PSG7Q13046 419 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 EIF4EBP1Q13541 118 aaPredicted RBP14.59□□□□□ -0.07
SCARF1-205ENST00000571272 Q3ZCU0 254 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 ZNF114Q8NC26 417 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 NCOR1O75376 2440 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 ST8SIA5O15466 376 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 VENTXO95231 258 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 QTRT1Q9BXR0 403 aaKnown RBP14.59□□□□□ -0.07
SCARF1-205ENST00000571272 MRPL37Q9BZE1 423 aaKnown RBP14.59□□□□□ -0.07
SCARF1-205ENST00000571272 ABI3Q9P2A4 366 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 C9orf172C9J069 976 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 C17orf112F2Z3M2 114 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 HNF1AP20823 631 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 PAX5Q02548 391 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 SLC10A1Q14973 349 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 DCAF10Q5QP82 559 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 COQ2Q96H96 371 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 CIB3Q96Q77 187 aaPredicted RBP14.59□□□□□ -0.07
SCARF1-205ENST00000571272 PSG11Q9UQ72 335 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 TRAPPC1Q9Y5R8 145 aa14.59□□□□□ -0.07
SCARF1-205ENST00000571272 OOEPA6NGQ2 149 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 RAB29O14966 203 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 TYMSP04818 313 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 ZNF766Q5HY98 468 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 TMEM256Q8N2U0 113 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 LURAP1Q96LR2 239 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 METRNQ9UJH8 293 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 MARCH11A6NNE9 402 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 C15orf62A8K5M9 175 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 SCGB1D1O95968 90 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 MPV17P39210 176 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 Q8N7P7 452 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 DCTN5Q9BTE1 182 aa14.58□□□□□ -0.08
SCARF1-205ENST00000571272 EREGO14944 169 aa14.57□□□□□ -0.08
SCARF1-205ENST00000571272 MLNRO43193 412 aa14.57□□□□□ -0.08
SCARF1-205ENST00000571272 LYZL6O75951 148 aa14.57□□□□□ -0.08
SCARF1-205ENST00000571272 CD82P27701 267 aa14.57□□□□□ -0.08
SCARF1-205ENST00000571272 CD1BP29016 333 aa14.57□□□□□ -0.08
SCARF1-205ENST00000571272 VWC2Q2TAL6 325 aa14.57□□□□□ -0.08
SCARF1-205ENST00000571272 FIP1L1Q6UN15 594 aaKnown RBP14.57□□□□□ -0.08
SCARF1-205ENST00000571272 TCF23Q7RTU1 214 aa14.57□□□□□ -0.08
SCARF1-205ENST00000571272 RYDENQ9NUL5 291 aaKnown RBP14.57□□□□□ -0.08
SCARF1-205ENST00000571272 DSPP15924 2871 aaKnown RBP14.57□□□□□ -0.08
SCARF1-205ENST00000571272 A0A1W2PPV4 95 aa14.57□□□□□ -0.08
SCARF1-205ENST00000571272 MRPL49Q13405 166 aaKnown RBP14.57□□□□□ -0.08
SCARF1-205ENST00000571272 GBGT1Q8N5D6 347 aa14.57□□□□□ -0.08
SCARF1-205ENST00000571272 SOX15O60248 233 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 NUPR1O60356 82 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 OR9G9P0C7N8 305 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 UBE2NP61088 152 aaKnown RBP14.56□□□□□ -0.08
SCARF1-205ENST00000571272 PRAMEF6Q5VXH4 476 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 OR13A1Q8NGR1 328 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 SGMS2Q8NHU3 365 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 ATG101Q9BSB4 218 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 FAM234AQ9H0X4 552 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 RBFOX2O43251 390 aaKnown RBP eCLIP14.56□□□□□ -0.08
SCARF1-205ENST00000571272 TEX38Q6PEX7 206 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 GCNT2Q8N0V5 402 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 SP1P08047 785 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 COL8A2P25067 703 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 GCH1P30793 250 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 RPL15P61313 204 aaKnown RBP14.56□□□□□ -0.08
SCARF1-205ENST00000571272 IQCJQ1A5X6 159 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 SLC35E4Q6ICL7 350 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 FZR1Q9UM11 496 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 TP53TG5Q9Y2B4 290 aa14.56□□□□□ -0.08
SCARF1-205ENST00000571272 HCFC1P51610 2035 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 PDE6DO43924 150 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 IGHV3-13P01766 116 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 IGHV3-7P01780 117 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 LCN2P80188 198 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 LBHQ53QV2 105 aaPredicted RBP14.55□□□□□ -0.08
SCARF1-205ENST00000571272 VKORC1L1Q8N0U8 176 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 KLF14Q8TD94 323 aaPredicted RBP14.55□□□□□ -0.08
SCARF1-205ENST00000571272 R3HDM4Q96D70 268 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 TAAR6Q96RI8 345 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 WDR83OSQ9Y284 106 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 TRBV20OR9-2A0A075B6H5 130 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 CD33P20138 364 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 C11orf53Q8IXP5 236 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 BEND2Q8NDZ0 799 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 CBLN4Q9NTU7 201 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 FKBP11Q9NYL4 201 aa14.55□□□□□ -0.08
SCARF1-205ENST00000571272 LAMTOR5O43504 91 aa14.54□□□□□ -0.08
SCARF1-205ENST00000571272 TDGF1P13385 188 aa14.54□□□□□ -0.08
SCARF1-205ENST00000571272 ACP1P24666 158 aa14.54□□□□□ -0.08
SCARF1-205ENST00000571272 CCKARP32238 428 aa14.54□□□□□ -0.08
SCARF1-205ENST00000571272 SPRY4Q9C004 299 aa14.54□□□□□ -0.08
SCARF1-205ENST00000571272 HES4Q9HCC6 221 aa14.54□□□□□ -0.08
SCARF1-205ENST00000571272 SPRR3Q9UBC9 169 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms