RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	CD200	P41217	278 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	CA7	P43166	264 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	GSK3B	P49841	420 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	RAB5B	P61020	215 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	PPP1CB	P62140	327 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	RHOB	P62745	196 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	RPL8	P62917	257 aa	Known RBP	3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	PSG4	Q00888	419 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	EMX2	Q04743	252 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	EBP	Q15125	230 aa	Known RBP	3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	RSU1	Q15404	277 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF791	Q3KP31	576 aa	Predicted RBP	3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZBED5	Q49AG3	693 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	TMEM128	Q5BJH2	165 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	RNASE10	Q5GAN6	216 aa	Known RBP	3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	SAMD13	Q5VXD3	122 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	PVRIG	Q6DKI7	326 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	SLC48A1	Q6P1K1	146 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	EPGN	Q6UW88	154 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	BAIAP2L2	Q6UXY1	529 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	FAM231D	Q6ZW35	169 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	SLC16A13	Q7RTY0	426 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	C10orf107	Q8IVU9	208 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	C4orf33	Q8N1A6	199 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	C1orf158	Q8N1D5	194 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	TMEM86B	Q8N661	226 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF615	Q8N8J6	731 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZFP62	Q8NB50	900 aa	Predicted RBP	3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	UBAC2	Q8NBM4	344 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF439	Q8NDP4	499 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR6N1	Q8NGY5	312 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	TM4SF18	Q96CE8	201 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	DDIT4L	Q96D03	193 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	C14orf144	Q96I85	54 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	P2RX4	Q99571	388 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	VPS25	Q9BRG1	176 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	OCR1	Q9BZK8	76 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR8D2	Q9GZM6	311 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR51J1	Q9H342	316 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF442	Q9H7R0	627 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	CXorf21	Q9HAI6	301 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	IDI2-AS1	Q9NZ38	188 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	CTSZ	Q9UBR2	303 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	L3MBTL1	Q9Y468	752 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR51B2	Q9Y5P1	312 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	NOTCH3	Q9UM47	2321 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	LRBA	P50851	2863 aa		3.17	□□□□□ -1.9
LRRC28-222	ENST00000561431	CELSR2	Q9HCU4	2923 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	SPTAN1	Q13813	2472 aa	Known RBP	3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	NBAS	A2RRP1	2371 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	MFNG	O00587	321 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	GABRP	O00591	440 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	COPE	O14579	308 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	CYB5B	O43169	146 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	TYROBP	O43914	113 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	REN	P00797	406 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	IGHV3-13	P01766	116 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	IL3	P08700	152 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	CCL3	P10147	92 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	RBP2	P50120	134 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	UBE2E1	P51965	193 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR12D2	P58182	307 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	HPCA	P84074	193 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF85	Q03923	595 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	PUDP	Q08623	228 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	BIK	Q13323	160 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	PPP1R1A	Q13522	171 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	CLINT1	Q14677	625 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	KIAA0040	Q15053	153 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	C1orf195	Q5TG92	126 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	TEX36	Q5VZQ5	186 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	SFXN4	Q6P4A7	337 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	OPN5	Q6U736	354 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	SCIMP	Q6UWF3	145 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	RNF165	Q6ZSG1	346 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	TMUB2	Q71RG4	321 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	PRSS48	Q7RTY5	328 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	C6orf120	Q7Z4R8	191 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	CEACAM19	Q7Z692	300 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	SLC25A42	Q86VD7	318 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	CARM1	Q86X55	608 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	PNKD	Q8N490	385 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR4P4	Q8NGL7	312 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR2G2	Q8NGZ5	317 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNRF2	Q8NHG8	242 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF675	Q8TD23	568 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	ITLN2	Q8WWU7	325 aa	Predicted RBP	3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	IL22RA2	Q969J5	263 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	NABP1	Q96AH0	204 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	DNAJA3	Q96EY1	480 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	SEC22A	Q96IW7	307 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	FCRL1	Q96LA6	429 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	DNAJC30	Q96LL9	226 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	UBE2E2	Q96LR5	201 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR5M11	Q96RB7	305 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	TBX15	Q96SF7	602 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	KCTD14	Q9BQ13	255 aa	Predicted RBP	3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	SOST	Q9BQB4	213 aa		3.16	□□□□□ -1.9
LRRC28-222	ENST00000561431	EBPL	Q9BY08	206 aa		3.16	□□□□□ -1.9

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