RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 TRGV3P03979 118 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 AMY1AP04745 511 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 HMGA2P52926 109 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 IGKV1D-16P01601 117 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 HKR1P10072 659 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 VDAC2P45880 294 aaPredicted RBP13.55□□□□□ -0.24
SHISA9-203ENST00000558583 CD300LDQ6UXZ3 194 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 SLC25A45Q8N413 288 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 TMEM56-RWDD3S4R434 201 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 CSRP2Q16527 193 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 ZNF721Q8TF20 911 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 RELQ04864 619 aaPredicted RBP13.55□□□□□ -0.24
SHISA9-203ENST00000558583 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
SHISA9-203ENST00000558583 TMEM238LA0A1B0GVL6 79 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 A6NJY4 79 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 GPX1P07203 203 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 ANOS1P23352 680 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 DDTP30046 118 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 FAM27E3Q08E93 113 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 ABHD12Q8N2K0 398 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 POLR2AP24928 1970 aaKnown RBP13.54□□□□□ -0.24
SHISA9-203ENST00000558583 TMEM127O75204 238 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 BGLAPP02818 100 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 HOXD4P09016 255 aaPredicted RBP13.54□□□□□ -0.24
SHISA9-203ENST00000558583 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHISA9-203ENST00000558583 FOXH1O75593 365 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 PET117Q6UWS5 81 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 RPL27AP46776 148 aaKnown RBP13.54□□□□□ -0.24
SHISA9-203ENST00000558583 PLPPR5Q32ZL2 321 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 C1orf53Q5VUE5 145 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 USP54Q70EL1 1684 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 ALS2Q96Q42 1657 aa13.54□□□□□ -0.24
SHISA9-203ENST00000558583 DXOO77932 396 aaKnown RBP13.53□□□□□ -0.24
SHISA9-203ENST00000558583 SMAGPQ0VAQ4 97 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 SNAI3Q3KNW1 292 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 METRNQ9UJH8 293 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 SCN1AP35498 2009 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 Q5BKY6 102 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 LEMD1Q68G75 181 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 LHFPL5Q8TAF8 219 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 TUBD1Q9UJT1 453 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 PIKFYVEQ9Y2I7 2098 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 TRAV12-3A0A0B4J271 114 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 TCRBV4S1A1TA0A5B7 111 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 NPIPB6E9PJ23 425 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 PEBP1P30086 187 aaKnown RBP13.53□□□□□ -0.24
SHISA9-203ENST00000558583 DOCK5Q9H7D0 1870 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 TPRP12270 2363 aaKnown RBP13.53□□□□□ -0.24
SHISA9-203ENST00000558583 PKD1L3Q7Z443 1732 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 IGLV3-16A0A075B6K0 115 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 A0A0J9YW62 118 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 ISG15P05161 165 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 DUX3Q96PT4 197 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 NPVFQ9HCQ7 196 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 TJP1Q07157 1748 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 IGHV3OR16-8A0A075B7F1 116 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 ERVH48-1M5A8F1 160 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 ZG16O60844 167 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 FOXA3P55318 350 aaPredicted RBP13.53□□□□□ -0.24
SHISA9-203ENST00000558583 ZNF501Q96CX3 271 aaPredicted RBP13.53□□□□□ -0.24
SHISA9-203ENST00000558583 MAP1LC3AQ9H492 121 aa13.53□□□□□ -0.24
SHISA9-203ENST00000558583 TRGC1P0CF51 173 aa13.52□□□□□ -0.24
SHISA9-203ENST00000558583 SNRPD3P62318 126 aaKnown RBP13.52□□□□□ -0.24
SHISA9-203ENST00000558583 UNC119Q13432 240 aa13.52□□□□□ -0.24
SHISA9-203ENST00000558583 SAP25Q8TEE9 199 aa13.52□□□□□ -0.24
SHISA9-203ENST00000558583 LRRC3BQ96PB8 259 aa13.52□□□□□ -0.24
SHISA9-203ENST00000558583 IMMP2LQ96T52 175 aa13.52□□□□□ -0.24
SHISA9-203ENST00000558583 J3QT63 122 aa13.52□□□□□ -0.24
SHISA9-203ENST00000558583 OR2H2O95918 312 aa13.52□□□□□ -0.24
SHISA9-203ENST00000558583 C10orf126Q8N4M7 172 aa13.52□□□□□ -0.24
SHISA9-203ENST00000558583 HIST1H1AQ02539 215 aaPredicted RBP13.52□□□□□ -0.25
SHISA9-203ENST00000558583 HOGA1Q86XE5 327 aa13.52□□□□□ -0.25
SHISA9-203ENST00000558583 GPR82Q96P67 336 aa13.52□□□□□ -0.25
SHISA9-203ENST00000558583 AMELYQ99218 206 aa13.52□□□□□ -0.25
SHISA9-203ENST00000558583 CBLN1P23435 193 aa13.52□□□□□ -0.25
SHISA9-203ENST00000558583 SCAND1P57086 179 aa13.52□□□□□ -0.25
SHISA9-203ENST00000558583 ZNF660Q6AZW8 331 aaPredicted RBP13.52□□□□□ -0.25
SHISA9-203ENST00000558583 EEF1AKMT3Q96AZ1 226 aa13.52□□□□□ -0.25
SHISA9-203ENST00000558583 SEC11BP0C7V7 166 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 H1FOOQ8IZA3 346 aaPredicted RBP13.51□□□□□ -0.25
SHISA9-203ENST00000558583 PGPEP1Q9NXJ5 209 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 A8MWL6 223 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 DEFB104AQ8WTQ1 72 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 MCM3APO60318 1980 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 GP6Q9HCN6 339 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 MOSP00540 346 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 IGHV3-11P01762 117 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 SRSF7Q16629 238 aaKnown RBP eCLIP13.51□□□□□ -0.25
SHISA9-203ENST00000558583 MRPL16Q9NX20 251 aaKnown RBP13.51□□□□□ -0.25
SHISA9-203ENST00000558583 KNL1Q8NG31 2342 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 RND2P52198 227 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 PSG4Q00888 419 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 SLC25A34Q6PIV7 304 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 UQCR10Q9UDW1 63 aa13.51□□□□□ -0.25
SHISA9-203ENST00000558583 ZNF645Q8N7E2 425 aa13.5□□□□□ -0.25
SHISA9-203ENST00000558583 WFDC6Q9BQY6 131 aa13.5□□□□□ -0.25
SHISA9-203ENST00000558583 GGACTQ9BVM4 153 aa13.5□□□□□ -0.25
SHISA9-203ENST00000558583 KLF4O43474 513 aa13.5□□□□□ -0.25
SHISA9-203ENST00000558583 NDUFA3O95167 84 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms