RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 ACSM3Q53FZ2 586 aa9.22□□□□□ -0.93
SNX6-209ENST00000557265 TMEM177Q53S58 311 aa9.22□□□□□ -0.93
SNX6-209ENST00000557265 CEMP1Q6PRD7 247 aaPredicted RBP9.22□□□□□ -0.93
SNX6-209ENST00000557265 IDO2Q6ZQW0 420 aa9.22□□□□□ -0.93
SNX6-209ENST00000557265 SRSF12Q8WXF0 261 aaKnown RBP9.22□□□□□ -0.93
SNX6-209ENST00000557265 GGTLC1Q9BX51 225 aa9.22□□□□□ -0.93
SNX6-209ENST00000557265 LPAR5Q9H1C0 372 aa9.22□□□□□ -0.93
SNX6-209ENST00000557265 C12orf4Q9NQ89 552 aa9.22□□□□□ -0.93
SNX6-209ENST00000557265 SDHAF2Q9NX18 166 aa9.22□□□□□ -0.93
SNX6-209ENST00000557265 LOC102724200A0A096LPH7 203 aaPredicted RBP9.21□□□□□ -0.94
SNX6-209ENST00000557265 EFCAB10A6NFE3 127 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 TRDCB7Z8K6 153 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 PPP5D1E7EU14 171 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 OR2C1O95371 312 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 CD3GP09693 182 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 SRMP19623 302 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 EWSR1Q01844 656 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNX6-209ENST00000557265 RTL8BQ17RB0 113 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 VMA21Q3ZAQ7 101 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 TTC23Q5W5X9 447 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 TEX45Q8NA69 505 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 NECAP1Q8NC96 275 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 ACOT12Q8WYK0 555 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 OR2D2Q9H210 308 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 SMPD3Q9NY59 655 aaPredicted RBP9.21□□□□□ -0.94
SNX6-209ENST00000557265 DMRT1Q9Y5R6 373 aa9.21□□□□□ -0.94
SNX6-209ENST00000557265 LGALS9O00182 355 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 GGCTO75223 188 aaKnown RBP9.2□□□□□ -0.94
SNX6-209ENST00000557265 OR2J3O76001 311 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 BPNT1O95861 308 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 CBLN1P23435 193 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 SERPINB10P48595 397 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 TMEM50BP56557 158 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 WNT4P56705 351 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 UBE2KP61086 200 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 TAGLNQ01995 201 aaKnown RBP9.2□□□□□ -0.94
SNX6-209ENST00000557265 C15orf32Q32M92 178 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 RBM48Q5RL73 367 aaKnown RBP9.2□□□□□ -0.94
SNX6-209ENST00000557265 TMEM61Q8N0U2 210 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 FAM89BQ8N5H3 189 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 OR52B4Q8NGK2 314 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 CACNG8Q8WXS5 425 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 PHYHIPQ92561 330 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 C5orf30Q96GV9 206 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 ARHGAP5-AS1Q96IT6 56 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 CMSS1Q9BQ75 279 aaKnown RBP9.2□□□□□ -0.94
SNX6-209ENST00000557265 URM1Q9BTM9 101 aaKnown RBP9.2□□□□□ -0.94
SNX6-209ENST00000557265 HSF4Q9ULV5 492 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 KIAA1109Q2LD37 5005 aa9.2□□□□□ -0.94
SNX6-209ENST00000557265 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 FOXI3A8MTJ6 420 aaPredicted RBP9.19□□□□□ -0.94
SNX6-209ENST00000557265 MYL12BO14950 172 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 BET1O15155 118 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 DEDDO75618 318 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 RRASP10301 218 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 P2RY14Q15391 338 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 IGSF11Q5DX21 431 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 ZNF57Q68EA5 555 aaPredicted RBP9.19□□□□□ -0.94
SNX6-209ENST00000557265 LYG2Q86SG7 212 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 PQLC1Q8N2U9 271 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 TTC9CQ8N5M4 171 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 OR6M1Q8NGM8 313 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 SPIN2AQ99865 258 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 SPIN2BQ9BPZ2 258 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 PECRQ9BY49 303 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 ZNF430Q9H8G1 570 aaPredicted RBP9.19□□□□□ -0.94
SNX6-209ENST00000557265 KLK5Q9Y337 293 aaPredicted RBP9.19□□□□□ -0.94
SNX6-209ENST00000557265 KMT2AQ03164 3969 aa9.19□□□□□ -0.94
SNX6-209ENST00000557265 ZNF320A2RRD8 509 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 FABP7O15540 132 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 ACTL6BO94805 426 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 SCAF4O95104 1147 aaKnown RBP9.18□□□□□ -0.94
SNX6-209ENST00000557265 NDUFB8O95169 186 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 CRYZL1O95825 349 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 IGHV3-23P01764 117 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 CD37P11049 281 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 TNFRSF9Q07011 255 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 HSD17B12Q53GQ0 312 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 FAM209BQ5JX69 171 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 C10orf55Q5SWW7 151 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 CEACAM19Q7Z692 300 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 GPHB5Q86YW7 130 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 WFDC3Q8IUB2 231 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 C10orf67Q8IYJ2 551 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 MS4A15Q8N5U1 240 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 NANOGP1Q8N7R0 232 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 UXS1Q8NBZ7 420 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 OR4A4PQ8NGN8 299 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 OR10J5Q8NHC4 309 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 CYGBQ8WWM9 190 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 S100A14Q9HCY8 104 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 MLXQ9UH92 298 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 FBXL7Q9UJT9 491 aa9.18□□□□□ -0.94
SNX6-209ENST00000557265 TMEM213A2RRL7 107 aa9.17□□□□□ -0.94
SNX6-209ENST00000557265 SPRY2O43597 315 aa9.17□□□□□ -0.94
SNX6-209ENST00000557265 GSTT2P0CG29 244 aa9.17□□□□□ -0.94
SNX6-209ENST00000557265 GSTT2BP0CG30 244 aa9.17□□□□□ -0.94
SNX6-209ENST00000557265 BMI1P35226 326 aa9.17□□□□□ -0.94
SNX6-209ENST00000557265 ARL3P36405 182 aa9.17□□□□□ -0.94
SNX6-209ENST00000557265 TPBGQ13641 420 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms