RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 MYCBPQ99417 103 aaPredicted RBP9.51□□□□□ -0.89
VPS29-211ENST00000553128 NICN1Q9BSH3 213 aa9.51□□□□□ -0.89
VPS29-211ENST00000553128 CHMP1AQ9HD42 196 aaPredicted RBP9.51□□□□□ -0.89
VPS29-211ENST00000553128 PLA2G2EQ9NZK7 142 aa9.51□□□□□ -0.89
VPS29-211ENST00000553128 APOBP04114 4563 aaKnown RBP9.5□□□□□ -0.89
VPS29-211ENST00000553128 TRBV5-7A0A0A0MS05 114 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 IGKV1-6A0A0C4DH72 117 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 A8MWP6 167 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 IGLL5B9A064 214 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 DYNC1I1O14576 645 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 SHOXO15266 292 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 GYG2O15488 501 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 OGG1O15527 345 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 SCTP09683 121 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 ZBTB25P24278 435 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 HTR2CP28335 458 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 ETV1P50549 477 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 PRSS8Q16651 343 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 ODF3L2Q3SX64 289 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 CLEC19AQ6UXS0 136 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 ZNF575Q86XF7 245 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 NECAP1Q8NC96 275 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 EDARADDQ8WWZ3 215 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 SMIM19Q96E16 107 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 NEDD4LQ96PU5 975 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 KCNK15Q9H427 330 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 CKLFQ9UBR5 152 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 ZNF221Q9UK13 617 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 EXOSC1Q9Y3B2 195 aaKnown RBP9.5□□□□□ -0.89
VPS29-211ENST00000553128 AP4S1Q9Y587 144 aa9.5□□□□□ -0.89
VPS29-211ENST00000553128 KIR2DL5BA0A0G2JN68 375 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 KIR2DL5BA0A0G2JPC4 375 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 SNTNA6NMZ2 147 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 DEFB4AO15263 64 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 IFNA4P05014 189 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 ALPLP05186 524 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 ARL3P36405 182 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 HLA-DRB3P79483 266 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 TAGLNQ01995 201 aaKnown RBP9.49□□□□□ -0.89
VPS29-211ENST00000553128 Q499Y3 187 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 TMEM177Q53S58 311 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 RBPMS2Q6ZRY4 209 aaKnown RBP9.49□□□□□ -0.89
VPS29-211ENST00000553128 KIR2DL5AQ8N109 375 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 TTC9CQ8N5M4 171 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 ZFP41Q8N8Y5 198 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 KIR2DL5BQ8NHK3 375 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 ACOT12Q8WYK0 555 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 SLC7A6OSQ96CW6 309 aaPredicted RBP9.49□□□□□ -0.89
VPS29-211ENST00000553128 MAP6D1Q9H9H5 199 aa9.49□□□□□ -0.89
VPS29-211ENST00000553128 A0A0A6YYD4 124 aa9.48□□□□□ -0.89
VPS29-211ENST00000553128 HMX3A6NHT5 357 aa9.48□□□□□ -0.89
VPS29-211ENST00000553128 DNAL1Q4LDG9 190 aa9.48□□□□□ -0.89
VPS29-211ENST00000553128 ZNF585BQ52M93 769 aa9.48□□□□□ -0.89
VPS29-211ENST00000553128 PGLYRP3Q96LB9 341 aa9.48□□□□□ -0.89
VPS29-211ENST00000553128 ZNF430Q9H8G1 570 aaPredicted RBP9.48□□□□□ -0.89
VPS29-211ENST00000553128 MRPS18AQ9NVS2 196 aaKnown RBP9.48□□□□□ -0.89
VPS29-211ENST00000553128 SDHAF2Q9NX18 166 aa9.48□□□□□ -0.89
VPS29-211ENST00000553128 RDH8Q9NYR8 311 aa9.48□□□□□ -0.89
VPS29-211ENST00000553128 AK3Q9UIJ7 227 aa9.48□□□□□ -0.89
VPS29-211ENST00000553128 FBXL7Q9UJT9 491 aa9.48□□□□□ -0.89
VPS29-211ENST00000553128 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 CD3GP09693 182 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 C8orf88P0DMB2 117 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 MFAP2P55001 183 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 UBE2KP61086 200 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 RPS27AP62979 156 aaKnown RBP9.47□□□□□ -0.89
VPS29-211ENST00000553128 ZNF124Q15973 351 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 FAM106AQ4KMX7 169 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 FAM209BQ5JX69 171 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 MOB1BQ7L9L4 216 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 CEACAM19Q7Z692 300 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 CDH26Q8IXH8 852 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 TEX45Q8NA69 505 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 OR5B3Q8NH48 314 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 RHOXF1Q8NHV9 184 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 APH1BQ8WW43 257 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 CENPNQ96H22 339 aaPredicted RBP9.47□□□□□ -0.89
VPS29-211ENST00000553128 FANCD2OSQ96PS1 177 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 RARRES2Q99969 163 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 MFFQ9GZY8 342 aa9.47□□□□□ -0.89
VPS29-211ENST00000553128 C11orf68Q9H3H3 251 aaKnown RBP9.47□□□□□ -0.89
VPS29-211ENST00000553128 TRBV6-6A0A0A6YYG2 114 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 IGHV3-35A0A0C4DH35 117 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 TEX22C9J3V5 150 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 E7EUB6 86 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 M0R2N4 97 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 EI24O14681 340 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 TCTAP57738 103 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 UNC119Q13432 240 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 SMN1Q16637 294 aaKnown RBP9.46□□□□□ -0.9
VPS29-211ENST00000553128 YIF1BQ5BJH7 314 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 APRG1Q8IVJ8 170 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 SLC38A6Q8IZM9 456 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.46□□□□□ -0.9
VPS29-211ENST00000553128 DERL3Q96Q80 235 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 OR2D2Q9H210 308 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 Q9N2K0 584 aa9.46□□□□□ -0.9
VPS29-211ENST00000553128 BABAM2Q9NXR7 383 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms