RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 MECP2P51608 486 aaKnown RBP8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 AQP4P55087 323 aa8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 TAGLNQ01995 201 aaKnown RBP8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 ZNF343Q6P1L6 599 aa8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 HARBI1Q96MB7 349 aa8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 DUSP21Q9H596 190 aa8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 PALMDQ9NP74 551 aa8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 COA4Q9NYJ1 87 aa8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 PEF1Q9UBV8 284 aaKnown RBP8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 SELENOKQ9Y6D0 94 aa8.77□□□□□ -1.01
PRPF40B-212ENST00000551111 A0A075B6Q4 140 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 TRBV6-7A0A0A0MS04 114 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 J3QRK9 145 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 SHOXO15266 292 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 ZNF45Q02386 682 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 TMEM177Q53S58 311 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 C10orf55Q5SWW7 151 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 C19orf35Q6ZS72 473 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 ADAD2Q8NCV1 583 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 OR56B1Q8NGI3 324 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 OR4A4PQ8NGN8 299 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 DDB2Q92466 427 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 FAM110AQ9BQ89 295 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 CABLES2Q9BTV7 478 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 WFDC10AQ9H1F0 79 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 MGAT4AQ9UM21 535 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 V9GY05 133 aa8.76□□□□□ -1.01
PRPF40B-212ENST00000551111 A0A0G2JLM5 398 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 H3BUA1 57 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 RAB27BO00194 218 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 BMPR1BO00238 502 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 MFNGO00587 321 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 DUTP33316 252 aaKnown RBP8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 LGALS7P47929 136 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 SSX1Q16384 188 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 TNXAQ16473 311 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 PRSS8Q16651 343 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 NR2C2APQ86WQ0 139 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 SGPP2Q8IWX5 399 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 RAB3CQ96E17 227 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 MGLLQ99685 303 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 AKIP1Q9NQ31 210 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 SCN3BQ9NY72 215 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 RAB22AQ9UL26 194 aa8.75□□□□□ -1.01
PRPF40B-212ENST00000551111 SMIM30A4D0T7 59 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 ZNF785A8K8V0 405 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 RGS10O43665 173 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 BRI3O95415 125 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 CRYZL1O95825 349 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 HLA-AP01891 365 aaKnown RBP8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 CD7P09564 240 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 RPL30P62888 115 aaKnown RBP8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 MLLT11Q13015 90 aaPredicted RBP8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 LINC00322Q6ZN03 302 aaPredicted RBP8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 OR10R2Q8NGX6 335 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 OR10J5Q8NHC4 309 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 SRSF12Q8WXF0 261 aaKnown RBP8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 ISOC1Q96CN7 298 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 PHB2Q99623 299 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 SPATA25Q9BR10 227 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 CCDC90BQ9GZT6 254 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 ZNF430Q9H8G1 570 aaPredicted RBP8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 PLEKHA3Q9HB20 300 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 DMRT1Q9Y5R6 373 aa8.74□□□□□ -1.01
PRPF40B-212ENST00000551111 ALMS1Q8TCU4 4167 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 A0A1B0GW64 132 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 RBMY1BA6NDE4 496 aaKnown RBP8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 RBMY1EA6NEQ0 496 aaKnown RBP8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 HMX3A6NHT5 357 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 PPP5D1E7EU14 171 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 E7EUB6 86 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 ARL6IP5O75915 188 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 IGLV2-14P01704 120 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 OR9G9P0C7N8 305 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 RBMY1DP0C7P1 496 aaKnown RBP8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 CRHBPP24387 322 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 SERPINB10P48595 397 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 UBE2KP61086 200 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 RHOGP84095 191 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 RPEL1Q2QD12 228 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 CD300EQ496F6 205 aaPredicted RBP8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 OR2B11Q5JQS5 317 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 H1FOOQ8IZA3 346 aaPredicted RBP8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 VKORC1L1Q8N0U8 176 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 DEFB125Q8N687 156 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 TEX45Q8NA69 505 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 ACOT12Q8WYK0 555 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 GPHA2Q96T91 129 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 HIPK2Q9H2X6 1198 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 TUBA4BQ9H853 241 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 TPRKBQ9Y3C4 175 aa8.73□□□□□ -1.01
PRPF40B-212ENST00000551111 TRBV9A0A0B4J1U6 114 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 IGKV1D-13A0A0B4J2D9 117 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 H0Y980 276 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 SAA1P0DJI8 122 aaPredicted RBP8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 IGKV1-13P0DP09 117 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 HIST1H1DP16402 221 aaKnown RBP8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 AADACP22760 399 aa8.72□□□□□ -1.01
PRPF40B-212ENST00000551111 BRWD1-AS2P59051 145 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms