RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PPP1R2P9O14990 202 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 CLDN14O95500 239 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 EIF2S3P41091 472 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 REG1BP48304 166 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 FAM3BP58499 235 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 MOB1BQ7L9L4 216 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 CD177Q8N6Q3 437 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 Q8NFD4 153 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 RAB24Q969Q5 203 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 TAAR6Q96RI8 345 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 ZNF71Q9NQZ8 489 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 LRRC30A6NM36 301 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 CYB5R3P00387 301 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 IFNA1P01562 189 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 APELAP0DMC3 54 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 AGAP20933 346 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 FAM27E3Q08E93 113 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 DBX2Q6ZNG2 339 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 ITLN1Q8WWA0 313 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 C11orf1Q9H5F2 150 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 SPINK4O60575 86 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 HSPB1P04792 205 aaKnown RBP11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 ZNF883P0CG24 379 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 ZNF506Q5JVG8 444 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 INO80CQ6PI98 192 aaPredicted RBP11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 HEPN1Q6WQI6 88 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 C1orf87Q8N0U7 546 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 GP6Q9HCN6 339 aa11.42□□□□□ -0.58
PRPF40B-209ENST00000548825 NAV3Q8IVL0 2385 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 IGHV2OR16-5A0A0B4J2B6 119 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 AQP7O14520 342 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 ERVK-16P61578 105 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 LRRC75BQ2VPJ9 315 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 LINC00596Q86U02 117 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 ZDHHC11Q9H8X9 412 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 ANKHD1Q8IWZ3 2542 aaKnown RBP11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 BTBD17A6NE02 478 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 ZNF705GA8MUZ8 300 aaPredicted RBP11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 KLK10O43240 276 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 OR9G9P0C7N8 305 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 TRGC1P0CF51 173 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 HCFC1P51610 2035 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 TMEM41BQ5BJD5 291 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 MALRD1Q5VYJ5 2156 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 BHLHA15Q7RTS1 189 aaPredicted RBP11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 PFDN5Q99471 154 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 GSN-AS1Q9NRJ2 163 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 WIPI2Q9Y4P8 454 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 PTPRQQ9UMZ3 2332 aa11.41□□□□□ -0.58
PRPF40B-209ENST00000548825 IGHV1-18A0A0C4DH31 117 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 DUXBA0A1W2PPF3 345 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 H7BYZ3 331 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 CLDN34H7C241 214 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 SLC31A2O15432 143 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 ZNF146Q15072 292 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 MSMPQ1L6U9 139 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 C16orf82Q7Z2V1 217 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 WFDC8Q8IUA0 241 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 WDR31Q8NA23 367 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 OR5B12Q96R08 314 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 CCL13Q99616 98 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 IQCF6A8MYZ5 107 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 PRB4P10163 310 aaPredicted RBP11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 MIC13Q5XKP0 118 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 ZNF251Q9BRH9 671 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 DERL1Q9BUN8 251 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 PARD6AQ9NPB6 346 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 VAX2Q9UIW0 290 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 CSMD1Q96PZ7 3565 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 TANC2Q9HCD6 1990 aa11.4□□□□□ -0.58
PRPF40B-209ENST00000548825 K7EM74 188 aa11.4□□□□□ -0.59
PRPF40B-209ENST00000548825 ERVK11-1P61568 191 aa11.4□□□□□ -0.59
PRPF40B-209ENST00000548825 MEF2BQ02080 365 aaPredicted RBP11.4□□□□□ -0.59
PRPF40B-209ENST00000548825 FAM90A2PQ658T7 463 aa11.4□□□□□ -0.59
PRPF40B-209ENST00000548825 Q6ZS49 121 aa11.4□□□□□ -0.59
PRPF40B-209ENST00000548825 C11orf53Q8IXP5 236 aa11.4□□□□□ -0.59
PRPF40B-209ENST00000548825 IL22RA2Q969J5 263 aa11.4□□□□□ -0.59
PRPF40B-209ENST00000548825 PCGF1Q9BSM1 259 aa11.4□□□□□ -0.59
PRPF40B-209ENST00000548825 GAR1Q9NY12 217 aaKnown RBP11.4□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST1H2BKO60814 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 SS18L1O75177 396 aaPredicted RBP11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 GYPAP02724 150 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST1H2BJP06899 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 COX5AP20674 150 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST1H2BOP23527 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST1H2BBP33778 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST1H2BDP58876 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST1H2BCP62807 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST2H2BEQ16778 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 OR13D1Q8NGV5 346 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST1H2BHQ93079 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 LSM10Q969L4 123 aaKnown RBP11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 RHOVQ96L33 236 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 S1PR3Q99500 378 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST1H2BNQ99877 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 HIST1H2BMQ99879 126 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 GCM1Q9NP62 436 aa11.39□□□□□ -0.59
PRPF40B-209ENST00000548825 RRHO14718 337 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms