RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ZNF230Q9UIE0 474 aaPredicted RBP12.51□□□□□ -0.41
DDX55-212ENST00000544738 NOTOA8MTQ0 251 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 H3BUA1 57 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 CNIH1O95406 144 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 ATP6V1G2O95670 118 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 HSPB1P04792 205 aaKnown RBP12.5□□□□□ -0.41
DDX55-212ENST00000544738 DTYMKP23919 212 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 PSMB9P28065 219 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 TPPP2P59282 170 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 RTL8BQ17RB0 113 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 SPARTQ8N0X7 666 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 CASTOR1Q8WTX7 329 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 MAFIPQ8WZ33 124 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 DLX4Q92988 240 aaPredicted RBP12.5□□□□□ -0.41
DDX55-212ENST00000544738 ADTRPQ96IZ2 230 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 MS4A10Q96PG2 267 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 ALX4Q9H161 411 aaPredicted RBP12.5□□□□□ -0.41
DDX55-212ENST00000544738 TPSG1Q9NRR2 321 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 SORL1Q92673 2214 aa12.5□□□□□ -0.41
DDX55-212ENST00000544738 A0A0B4J203 849 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 SAP30O75446 220 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 SCGNO76038 276 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 JTBO76095 146 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 IGLV2-23P01705 113 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 TRGV3P03979 118 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 CDNFQ49AH0 187 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 TMEM177Q53S58 311 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 NR2C2APQ86WQ0 139 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 GRPEL2Q8TAA5 225 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 RHOVQ96L33 236 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 HARBI1Q96MB7 349 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 ZNF355PQ9NSJ1 428 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 TXNL4BQ9NX01 149 aaKnown RBP12.49□□□□□ -0.41
DDX55-212ENST00000544738 STUB1Q9UNE7 303 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 SSR3Q9UNL2 185 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 PCLOQ9Y6V0 5065 aa12.49□□□□□ -0.41
DDX55-212ENST00000544738 IGHV4OR15-8A0A075B7B6 117 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 A0A087WW49 117 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 A0A0G2JLM5 398 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 SHOXO15266 292 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 IGHV3-11P01762 117 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 CTXN2P0C2S0 81 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 FRMD6-AS1P0C7T7 363 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 SLURP1P55000 103 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 PITPNAQ00169 270 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 ACSM6Q6P461 480 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 H1FOOQ8IZA3 346 aaPredicted RBP12.48□□□□□ -0.41
DDX55-212ENST00000544738 POC5Q8NA72 575 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 BVESQ8NE79 360 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 ISOC1Q96CN7 298 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 DCSTAMPQ9H295 470 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 RYR1P21817 5038 aa12.48□□□□□ -0.41
DDX55-212ENST00000544738 CRYGBP07316 175 aa12.47□□□□□ -0.41
DDX55-212ENST00000544738 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
DDX55-212ENST00000544738 VMA21Q3ZAQ7 101 aa12.47□□□□□ -0.41
DDX55-212ENST00000544738 HACD4Q5VWC8 232 aa12.47□□□□□ -0.41
DDX55-212ENST00000544738 C13orf42A0A1B0GVH6 325 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 SMIM30A4D0T7 59 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 RBMY1BA6NDE4 496 aaKnown RBP12.46□□□□□ -0.41
DDX55-212ENST00000544738 RBMY1EA6NEQ0 496 aaKnown RBP12.46□□□□□ -0.41
DDX55-212ENST00000544738 SLC22A5O76082 557 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 BRI3O95415 125 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 RBMY1DP0C7P1 496 aaKnown RBP12.46□□□□□ -0.41
DDX55-212ENST00000544738 SNRPBP14678 240 aaKnown RBP12.46□□□□□ -0.41
DDX55-212ENST00000544738 DUTP33316 252 aaKnown RBP12.46□□□□□ -0.41
DDX55-212ENST00000544738 TEX45Q8NA69 505 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 OR5T1Q8NG75 326 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 OR6Q1Q8NGQ2 317 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 OSR1Q8TAX0 266 aaPredicted RBP12.46□□□□□ -0.41
DDX55-212ENST00000544738 DDB2Q92466 427 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 OR4C12Q96R67 309 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 ST6GALNAC5Q9BVH7 336 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 ELOVL1Q9BW60 279 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 RANGRFQ9HD47 186 aaPredicted RBP12.46□□□□□ -0.41
DDX55-212ENST00000544738 DAPK2Q9UIK4 370 aa12.46□□□□□ -0.41
DDX55-212ENST00000544738 IGKV1D-8A0A087WSZ0 117 aa12.45□□□□□ -0.42
DDX55-212ENST00000544738 ZP3P21754 424 aa12.45□□□□□ -0.42
DDX55-212ENST00000544738 UBE2KP61086 200 aa12.45□□□□□ -0.42
DDX55-212ENST00000544738 SSBP2P81877 361 aaPredicted RBP12.45□□□□□ -0.42
DDX55-212ENST00000544738 C5orf30Q96GV9 206 aa12.45□□□□□ -0.42
DDX55-212ENST00000544738 ELF5Q9UKW6 265 aaPredicted RBP12.45□□□□□ -0.42
DDX55-212ENST00000544738 RRP15Q9Y3B9 282 aaKnown RBP12.45□□□□□ -0.42
DDX55-212ENST00000544738 OR2W1Q9Y3N9 320 aa12.45□□□□□ -0.42
DDX55-212ENST00000544738 SRRM4A7MD48 611 aaKnown RBP12.44□□□□□ -0.42
DDX55-212ENST00000544738 LINC00473A8K010 186 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 CRYZL1O95825 349 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 AADACP22760 399 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 SCAND1P57086 179 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 GNG2P59768 71 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 SFXN4Q6P4A7 337 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 CNIH2Q6PI25 160 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 ZNF773Q6PK81 442 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 ZNF645Q8N7E2 425 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 EDA2RQ9HAV5 297 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 PRELID3BQ9Y3B1 194 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 FRAS1Q86XX4 4008 aa12.44□□□□□ -0.42
DDX55-212ENST00000544738 TMEM235A6NFC5 223 aa12.43□□□□□ -0.42
DDX55-212ENST00000544738 CREBL2O60519 120 aaPredicted RBP12.43□□□□□ -0.42
DDX55-212ENST00000544738 HLA-DQB1P01920 261 aa12.43□□□□□ -0.42
DDX55-212ENST00000544738 SPNP16150 400 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms