RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 FBLL1A6NHQ2 334 aaKnown RBP16.57■□□□□ 0.24
SUDS3-204ENST00000543473 LEPROTL1O95214 131 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 FBXW9Q5XUX1 488 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 OR1L8Q8NGR8 309 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 GREB1Q4ZG55 1949 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 CLDN14O95500 239 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 SOX8P57073 446 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 SPSB4Q96A44 273 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 TMEM45BQ96B21 275 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 A0A1W2PPE3 182 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 SAXO1Q8IYX7 474 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 LOXL4Q96JB6 756 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 TRBV6-7A0A0A0MS04 114 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 K7ESF4 209 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 SP9P0CG40 484 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 MST1P26927 711 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 LRRC75BQ2VPJ9 315 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 MOGAT3Q86VF5 341 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 ZCCHC14Q8WYQ9 949 aaKnown RBP16.56■□□□□ 0.24
SUDS3-204ENST00000543473 STPG1Q5TH74 334 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 SLC25A34Q6PIV7 304 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 ZNF71Q9NQZ8 489 aaPredicted RBP16.56■□□□□ 0.24
SUDS3-204ENST00000543473 CHD5Q8TDI0 1954 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 K7N7A8 449 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 CRYBB3P26998 211 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 TMEM116Q8NCL8 245 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 OR5R1Q8NH85 324 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 WDYHV1Q96HA8 205 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 C10orf128Q5T292 105 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 RIPPLY2Q5TAB7 128 aa16.56■□□□□ 0.24
SUDS3-204ENST00000543473 NFAM1Q8NET5 270 aaPredicted RBP16.56■□□□□ 0.24
SUDS3-204ENST00000543473 MARCH11A6NNE9 402 aa16.55■□□□□ 0.24
SUDS3-204ENST00000543473 S1PR2O95136 353 aa16.55■□□□□ 0.24
SUDS3-204ENST00000543473 CA2P00918 260 aa16.55■□□□□ 0.24
SUDS3-204ENST00000543473 AMY1AP04745 511 aa16.55■□□□□ 0.24
SUDS3-204ENST00000543473 CCL20P78556 96 aa16.55■□□□□ 0.24
SUDS3-204ENST00000543473 CCL17Q92583 94 aa16.55■□□□□ 0.24
SUDS3-204ENST00000543473 TRBV9A0A0B4J1U6 114 aa16.55■□□□□ 0.24
SUDS3-204ENST00000543473 ICE1Q9Y2F5 2266 aa16.55■□□□□ 0.24
SUDS3-204ENST00000543473 TMPRSS2O15393 492 aa16.55■□□□□ 0.24
SUDS3-204ENST00000543473 JOSD1Q15040 202 aaPredicted RBP16.55■□□□□ 0.24
SUDS3-204ENST00000543473 DPRXA6NFQ7 191 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 DRAM1Q8N682 238 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 WNT5BQ9H1J7 359 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 FOXD3Q9UJU5 478 aaPredicted RBP16.54■□□□□ 0.24
SUDS3-204ENST00000543473 TP53BP1Q12888 1972 aaPredicted RBP16.54■□□□□ 0.24
SUDS3-204ENST00000543473 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.54■□□□□ 0.24
SUDS3-204ENST00000543473 PRDX2P32119 198 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 RELBQ01201 579 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 RBM14Q96PK6 669 aaKnown RBP16.54■□□□□ 0.24
SUDS3-204ENST00000543473 PKIBQ9C010 78 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 ZFP30Q9Y2G7 519 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 ANK1P16157 1881 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 SMIM17P0DL12 118 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 UQCRFS1P47985 274 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 OR10S1Q8NGN2 331 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 DNAJC4Q9NNZ3 241 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 AGFG2O95081 481 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 KCNMB1Q16558 191 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 HIST1H2BLQ99880 126 aa16.54■□□□□ 0.24
SUDS3-204ENST00000543473 ACP1P24666 158 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 OTX1P32242 354 aaPredicted RBP16.53■□□□□ 0.24
SUDS3-204ENST00000543473 TCTAP57738 103 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 LYRM7Q5U5X0 104 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 PRDM14Q9GZV8 571 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 PLSCR2Q9NRY7 297 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 GLRX2Q9NS18 164 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 TMEM140Q9NV12 185 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 CDC42EP3Q9UKI2 254 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 RPL13AP40429 203 aaKnown RBP16.53■□□□□ 0.24
SUDS3-204ENST00000543473 NMUP48645 174 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 COL25A1Q9BXS0 654 aaPredicted RBP16.53■□□□□ 0.24
SUDS3-204ENST00000543473 GBF1Q92538 1859 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 GPR179Q6PRD1 2367 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 NCBP2LA6PVI3 153 aaKnown RBP16.53■□□□□ 0.24
SUDS3-204ENST00000543473 LINC00869P0C866 280 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 RPL23P62829 140 aaKnown RBP16.53■□□□□ 0.24
SUDS3-204ENST00000543473 GFI1BQ5VTD9 330 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 IMMP2LQ96T52 175 aa16.53■□□□□ 0.24
SUDS3-204ENST00000543473 HIST3H2BBQ8N257 126 aa16.52■□□□□ 0.24
SUDS3-204ENST00000543473 OR8B3Q8NGG8 313 aa16.52■□□□□ 0.24
SUDS3-204ENST00000543473 RND1Q92730 232 aa16.52■□□□□ 0.24
SUDS3-204ENST00000543473 RPL31P62899 125 aaKnown RBP16.52■□□□□ 0.24
SUDS3-204ENST00000543473 INO80CQ6PI98 192 aaPredicted RBP16.52■□□□□ 0.23
SUDS3-204ENST00000543473 WFDC1Q9HC57 220 aa16.52■□□□□ 0.23
SUDS3-204ENST00000543473 SDK2Q58EX2 2172 aa16.52■□□□□ 0.23
SUDS3-204ENST00000543473 IGLV3-19P01714 112 aa16.52■□□□□ 0.23
SUDS3-204ENST00000543473 C1QL4Q86Z23 238 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 IGHV3OR15-7A0A075B7D8 119 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 TMSB15BA0A087X1C1 80 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 OR2T8A6NH00 312 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 MGST3O14880 152 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 FTH1P19P0C7X4 201 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 ADCYAP1P18509 176 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 COMPP49747 757 aaPredicted RBP16.51■□□□□ 0.23
SUDS3-204ENST00000543473 NUBP1P53384 320 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 TMEM170AQ8WVE7 144 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 C18orf12Q96KH6 178 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 NPCDR1Q9BY65 106 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 IGKV1-9A0A0C4DH69 117 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms