RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 RPEQ96AT9 228 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 SLC5A7Q9GZV3 580 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 MED28Q9H204 178 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 C5orf66Q9H5L9 145 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 MCUBQ9NWR8 336 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 UBQLN2Q9UHD9 624 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 GPR132Q9UNW8 380 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 VSIG4Q9Y279 399 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 NUBP2Q9Y5Y2 271 aa8.55□□□□□ -1.04
NPIPB3-210ENST00000542817 RPS10-NUDT3A0A1W2PQS6 291 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 A6NDX4 124 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 DISC1C4P0D8 188 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 M0R1X1 148 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 HOXA3O43365 443 aaPredicted RBP8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 PGLYRP1O75594 196 aaPredicted RBP8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 VENTXO95231 258 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 IGKV1-16P04430 117 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 IFNA6P05013 189 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 CEACAM3P40198 252 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 AP3S2P59780 193 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 RAB14P61106 215 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 DHODHQ02127 395 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 SCGB2B2Q4G0G5 96 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 TMEM65Q6PI78 240 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 PRIMA1Q86XR5 153 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 TGIF2LXQ8IUE1 241 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 TMEM230Q96A57 120 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 SSX3Q99909 188 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 PRRT1Q99946 306 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 FAM96BQ9Y3D0 163 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 COL6A5A8TX70 2615 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 KRBOX1C9JBD0 128 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 H3BUX3 64 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 TNFSF12O43508 249 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 VSIG10L2P0DP72 767 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 IL3RAP26951 378 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 CD1BP29016 333 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 INPP1P49441 399 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 HILS1P60008 231 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 HERV-K104P61576 105 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 SRSF2Q01130 221 aaKnown RBP8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 LRRC75BQ2VPJ9 315 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 THNSL2Q86YJ6 484 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 ADAD2Q8NCV1 583 aaKnown RBP8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 AKR1E2Q96JD6 320 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 S1PR3Q99500 378 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 SCP2D1Q9UJQ7 156 aa8.54□□□□□ -1.04
NPIPB3-210ENST00000542817 NAP1L6A6NFF2 107 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 SRRM4A7MD48 611 aaKnown RBP8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 CLDN34H7C241 214 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 I3L521 148 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 GPR31O00270 319 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 TXNL1O43396 289 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 CHST1O43916 411 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 NDUFB6O95139 128 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 AMY1AP04745 511 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 SNRNP70P08621 437 aaKnown RBP8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 ZP3P21754 424 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 RND3P61587 244 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 SURF2Q15527 256 aaPredicted RBP8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 ZNF585BQ52M93 769 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 PHLDA2Q53GA4 152 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 CCDC144NLQ6NUI1 221 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 MOB3BQ86TA1 216 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 EIF4E3Q8N5X7 224 aaKnown RBP8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 TMEM86BQ8N661 226 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 ZBTB34Q8NCN2 500 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 RBPMSQ93062 196 aaKnown RBP8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 EAF1Q96JC9 268 aaPredicted RBP8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 DUX5Q96PT3 197 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 CHIAQ9BZP6 476 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 DPAGT1Q9H3H5 408 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 SLC2A9Q9NRM0 540 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 FLVCR2Q9UPI3 526 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 TCF19Q9Y242 345 aa8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 RBM7Q9Y580 266 aaKnown RBP8.53□□□□□ -1.04
NPIPB3-210ENST00000542817 A0A0A6YYJ9 748 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 PRAF2O60831 178 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 RAMP3O60896 148 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 IGKV1D-33P01593 117 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 IGKV1-33P01594 117 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 IGLV2-23P01705 113 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 SULT1A3P0DMM9 295 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 SULT1A4P0DMN0 295 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 CNTFRP26992 372 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 FAUP35544 74 aaKnown RBP8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 THBS3P49746 956 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 F2RL1P55085 397 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 SUPT4H1P63272 117 aaKnown RBP8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 FCN2Q15485 313 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 LY6EQ16553 131 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 MRGPRG-AS1Q2M3A8 158 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 PXDC1Q5TGL8 231 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 ZNF66Q6ZN08 573 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 TBC1D26Q86UD7 250 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 COMMD7Q86VX2 200 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 TMEM219Q86XT9 240 aa8.52□□□□□ -1.05
NPIPB3-210ENST00000542817 SSMEM1Q8WWF3 244 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms