RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ZNF497Q6ZNH5 498 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 IL1F10Q8WWZ1 152 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 TMEM56Q96MV1 263 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 GCM1Q9NP62 436 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 TRAPPC2LQ9UL33 140 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 TMEM56-RWDD3S4R434 201 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 IGKV1-6A0A0C4DH72 117 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 SRRM5B3KS81 715 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 E7EQL1 145 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 TLE4Q04727 773 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 AESQ08117 197 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 RBMXL1Q96E39 390 aaKnown RBP12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 RIMS4Q9H426 269 aaPredicted RBP12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 IL19Q9UHD0 177 aa12.74□□□□□ -0.37
CLPTM1-202ENST00000541297 CYB5R3P00387 301 aaPredicted RBP12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 MDH2P40926 338 aaKnown RBP12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 RAB11AP62491 216 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 SRPXP78539 464 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 Q6ZS49 121 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 CD177Q8N6Q3 437 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 TPRX1Q8N7U7 411 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 GNG13Q9P2W3 67 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 KIR2DS1A0A191URI9 304 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 SIAH2O43255 324 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 CHST1O43916 411 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 CD3EP07766 207 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 PSG2P11465 335 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 TNFSF4P23510 183 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 DDTP30046 118 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 KIR2DS4P43632 304 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 GABRA2P47869 451 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 TLE1Q04724 770 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 KIR2DS1Q14954 304 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 ARFGEF3Q5TH69 2177 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 REC114Q7Z4M0 266 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 SPIN2AQ99865 258 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 SPIN2BQ9BPZ2 258 aa12.73□□□□□ -0.37
CLPTM1-202ENST00000541297 LOC102723971A0A1B0GUV8 181 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 PKIAP61925 76 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 ZNF818PQ6ZRF7 136 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 C1orf87Q8N0U7 546 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 WIPI2Q9Y4P8 454 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 IGKV1D-17A0A075B6S4 117 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 TK1P04183 234 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 MDKP21741 143 aaPredicted RBP12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 PRDX2P32119 198 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 SRSF7Q16629 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 FAM90A2PQ658T7 463 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 ZNF880Q6PDB4 577 aa12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 PACRGQ96M98 296 aaPredicted RBP12.72□□□□□ -0.37
CLPTM1-202ENST00000541297 A0A087X0M5 115 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 TRBV6-6A0A0A6YYG2 114 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 A0A1B0GX30 115 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 C17orf100A8MU93 164 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 ZG16O60844 167 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 HBE1P02100 147 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 NDUFB7P17568 137 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 ID3Q02535 119 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 THNSL2Q86YJ6 484 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 FAM185AQ8N0U4 392 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 GAPTQ8N292 157 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.37
CLPTM1-202ENST00000541297 ZFP92A6NM28 416 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 B4DEV8 164 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 GATA4P43694 442 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 OR3A1P47881 315 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 TAS2R30P59541 319 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 NMSQ5H8A3 153 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 DEFB108BQ8NET1 73 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 SNX22Q96L94 193 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 ATP5SQ99766 215 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 HIST1H2BLQ99880 126 aa12.71□□□□□ -0.38
CLPTM1-202ENST00000541297 H3BP45 60 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 LHBP01229 141 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 PAX9P55771 341 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 TFF3Q07654 80 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 BAXQ07812 192 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 EDDM3AQ14507 147 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 COQ2Q96H96 371 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 SSX3Q99909 188 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 OR1A1Q9P1Q5 309 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 RNF7Q9UBF6 113 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 IGKV1D-13A0A0B4J2D9 117 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 TSTD3H0UI37 97 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 CLDN34H7C241 214 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 PHOX2AO14813 284 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 IGKV1-13P0DP09 117 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 IL2RGP31785 369 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 CFHR2P36980 270 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 ZNRF1Q8ND25 227 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 RNF115Q9Y4L5 304 aa12.7□□□□□ -0.38
CLPTM1-202ENST00000541297 A0A1B0GU03 582 aa12.69□□□□□ -0.38
CLPTM1-202ENST00000541297 VSTM5A8MXK1 200 aa12.69□□□□□ -0.38
CLPTM1-202ENST00000541297 TNFSF12O43508 249 aa12.69□□□□□ -0.38
CLPTM1-202ENST00000541297 RND2P52198 227 aa12.69□□□□□ -0.38
CLPTM1-202ENST00000541297 DNLZQ5SXM8 178 aa12.69□□□□□ -0.38
CLPTM1-202ENST00000541297 OR10G4Q8NGN3 311 aa12.69□□□□□ -0.38
CLPTM1-202ENST00000541297 OR10J5Q8NHC4 309 aa12.69□□□□□ -0.38
CLPTM1-202ENST00000541297 ABHD14BQ96IU4 210 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms