RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 LINC00574Q9H8X3 128 aa14.83□□□□□ -0.04
GNE-204ENST00000539208 GFOD1Q9NXC2 390 aa14.83□□□□□ -0.04
GNE-204ENST00000539208 A0A1W2PPH5 198 aa14.82□□□□□ -0.04
GNE-204ENST00000539208 C1orf196B1AJZ1 125 aa14.82□□□□□ -0.04
GNE-204ENST00000539208 HOXA1P49639 335 aaPredicted RBP14.82□□□□□ -0.04
GNE-204ENST00000539208 SPCS3P61009 180 aa14.82□□□□□ -0.04
GNE-204ENST00000539208 RPL39P5Q59GN2 51 aa14.82□□□□□ -0.04
GNE-204ENST00000539208 FAM201AQ5SY85 155 aa14.82□□□□□ -0.04
GNE-204ENST00000539208 SSX8Q7RTT4 187 aa14.82□□□□□ -0.04
GNE-204ENST00000539208 RPP25LQ8N5L8 163 aaKnown RBP14.82□□□□□ -0.04
GNE-204ENST00000539208 DDB2Q92466 427 aa14.82□□□□□ -0.04
GNE-204ENST00000539208 MALSU1Q96EH3 234 aa14.82□□□□□ -0.04
GNE-204ENST00000539208 ZNF665Q9H7R5 613 aa14.82□□□□□ -0.04
GNE-204ENST00000539208 TRGV10A0A0A0MS01 117 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 MAP1LC3B2A6NCE7 125 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 TEX36Q5VZQ5 186 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 PLPPR2Q96GM1 343 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 YPEL4Q96NS1 127 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 GAFA1Q96PS6 74 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 S1PR3Q99500 378 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 MAP1LC3BQ9GZQ8 125 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 TP53TG5Q9Y2B4 290 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 A0A1W2PPE2 198 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 IFNA1P01562 189 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 ARG1P05089 322 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 NQO2P16083 231 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 RAB5AP20339 215 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 AGAP20933 346 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 ELLP55199 621 aaPredicted RBP14.81□□□□□ -0.04
GNE-204ENST00000539208 TMEM30BQ3MIR4 351 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 ZNF788Q6ZQV5 615 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 CORO2AQ92828 525 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 DIRC2Q96SL1 478 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 SLC39A9Q9NUM3 307 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 JKAMPQ9P055 326 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 VAX2Q9UIW0 290 aa14.81□□□□□ -0.04
GNE-204ENST00000539208 C15orf62A8K5M9 175 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 OR2C1O95371 312 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 SELLP14151 372 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 FGF7P21781 194 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 CEBPGP53567 150 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 ERVK-16P61578 105 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 RPP30P78346 268 aaKnown RBP14.8□□□□□ -0.04
GNE-204ENST00000539208 CT45A1Q5HYN5 189 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 PRAMEF5Q5TYX0 476 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 ACSM6Q6P461 480 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 Q8NA96 180 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 OR4A16Q8NH70 328 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 CT45A3Q8NHU0 189 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 ZNF835Q9Y2P0 537 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 ZFP92A6NM28 416 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 CYB5R3P00387 301 aaPredicted RBP14.8□□□□□ -0.04
GNE-204ENST00000539208 IGKV1D-33P01593 117 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 IGKV1-33P01594 117 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 TAGLN2P37802 199 aaKnown RBP14.8□□□□□ -0.04
GNE-204ENST00000539208 FGF8P55075 233 aaPredicted RBP14.8□□□□□ -0.04
GNE-204ENST00000539208 DLK1P80370 383 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 FAM90A2PQ658T7 463 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 LINC00518Q8N0U6 118 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 FAM24BQ8N5W8 94 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 CA5BP1Q8WTZ4 195 aa14.8□□□□□ -0.04
GNE-204ENST00000539208 AKAP13Q12802 2813 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 CADP27708 2225 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 ZNF729A6NN14 1252 aaPredicted RBP14.79□□□□□ -0.04
GNE-204ENST00000539208 B4DEV8 164 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 SLC31A2O15432 143 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 IFNA17P01571 189 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 IRF2P14316 349 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 RELBQ01201 579 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 RBMS3Q6XE24 437 aaKnown RBP14.79□□□□□ -0.04
GNE-204ENST00000539208 ZFP82Q8N141 532 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 CISD2Q8N5K1 135 aaKnown RBP14.79□□□□□ -0.04
GNE-204ENST00000539208 OR4S2Q8NH73 311 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 LHX4Q969G2 390 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 NPCDR1Q9BY65 106 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 SIRT7Q9NRC8 400 aa14.79□□□□□ -0.04
GNE-204ENST00000539208 ZFHX2Q9C0A1 2572 aaPredicted RBP14.79□□□□□ -0.04
GNE-204ENST00000539208 CTXND1A0A1B0GTU2 59 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 CXorf65A6NEN9 183 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 NDUFS6O75380 124 aaKnown RBP14.78□□□□□ -0.04
GNE-204ENST00000539208 OR2B8PP59922 312 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 SPINK9Q5DT21 86 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 ZNF439Q8NDP4 499 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 C2CD4CQ8TF44 421 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 ZNF251Q9BRH9 671 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 DSCAMO60469 2012 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 DPRXA6NFQ7 191 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 C17orf112F2Z3M2 114 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 IFNA4P05014 189 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 TNFRSF1AP19438 455 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 VDAC2P45880 294 aaPredicted RBP14.78□□□□□ -0.04
GNE-204ENST00000539208 THBS3P49746 956 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 RAB11AP62491 216 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 PNRC1Q12796 327 aaPredicted RBP14.78□□□□□ -0.04
GNE-204ENST00000539208 DUX4L9Q6RFH8 374 aaPredicted RBP14.78□□□□□ -0.04
GNE-204ENST00000539208 C1orf229Q6ZS94 237 aaPredicted RBP14.78□□□□□ -0.04
GNE-204ENST00000539208 TCF23Q7RTU1 214 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 ZNF709Q8N972 641 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 ADTRPQ96IZ2 230 aa14.78□□□□□ -0.04
GNE-204ENST00000539208 GGACTQ9BVM4 153 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms