RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 ARL6IP5O75915 188 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 HSMCR30P0CW71 290 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 PSMA1P25786 263 aaKnown RBP9.13□□□□□ -0.95
CHD7-207ENST00000527921 MLLT11Q13015 90 aaPredicted RBP9.13□□□□□ -0.95
CHD7-207ENST00000527921 TRAM1Q15629 374 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 ADAMTSL5Q6ZMM2 481 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 LINC00322Q6ZN03 302 aaPredicted RBP9.13□□□□□ -0.95
CHD7-207ENST00000527921 SGPP2Q8IWX5 399 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 ADAD2Q8NCV1 583 aaKnown RBP9.13□□□□□ -0.95
CHD7-207ENST00000527921 BVESQ8NE79 360 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 NRG4Q8WWG1 115 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 USMG5Q96IX5 58 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 HARBI1Q96MB7 349 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 SCN3BQ9NY72 215 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 PEF1Q9UBV8 284 aaKnown RBP9.13□□□□□ -0.95
CHD7-207ENST00000527921 ZNF230Q9UIE0 474 aaPredicted RBP9.13□□□□□ -0.95
CHD7-207ENST00000527921 RAB22AQ9UL26 194 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 V9GY05 133 aa9.13□□□□□ -0.95
CHD7-207ENST00000527921 IGKV1D-8A0A087WSZ0 117 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 TRBV9A0A0B4J1U6 114 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 MSGN1A6NI15 193 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 LINC00473A8K010 186 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 H0Y980 276 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 APELAP0DMC3 54 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 GNB3P16520 340 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 AADACP22760 399 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 DUTP33316 252 aaKnown RBP9.12□□□□□ -0.95
CHD7-207ENST00000527921 AQP4P55087 323 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 OR10A3P58181 314 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 UBE2KP61086 200 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 TAGLNQ01995 201 aaKnown RBP9.12□□□□□ -0.95
CHD7-207ENST00000527921 ZNF45Q02386 682 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 PRSS8Q16651 343 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 HES5Q5TA89 166 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 Q6ZS49 121 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 TEX45Q8NA69 505 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 OR10J5Q8NHC4 309 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 MAFIPQ8WZ33 124 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 ISOC1Q96CN7 298 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 RAB3CQ96E17 227 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 PALMDQ9NP74 551 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 DMRT1Q9Y5R6 373 aa9.12□□□□□ -0.95
CHD7-207ENST00000527921 BMPR1BO00238 502 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 SHOXO15266 292 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 RGS10O43665 173 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 OR2A4O95047 310 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 CRHBPP24387 322 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 MAP2K4P45985 399 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 SSX1Q16384 188 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 IDO2Q6ZQW0 420 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 PRSS48Q7RTY5 328 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 NR2C2APQ86WQ0 139 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 H1FOOQ8IZA3 346 aaPredicted RBP9.11□□□□□ -0.95
CHD7-207ENST00000527921 OR10R2Q8NGX6 335 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 SRSF12Q8WXF0 261 aaKnown RBP9.11□□□□□ -0.95
CHD7-207ENST00000527921 MGLLQ99685 303 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 SPATA25Q9BR10 227 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 VCXQ9H320 206 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 ACOT13Q9NPJ3 140 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 COA4Q9NYJ1 87 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 ELF5Q9UKW6 265 aaPredicted RBP9.11□□□□□ -0.95
CHD7-207ENST00000527921 TPRKBQ9Y3C4 175 aa9.11□□□□□ -0.95
CHD7-207ENST00000527921 A0A0B4J203 849 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 IFITM5A6NNB3 132 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 IGLV2-14P01704 120 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 PRH1P02810 166 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 OR9G9P0C7N8 305 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 RRASP10301 218 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 HIST1H1DP16402 221 aaKnown RBP9.1□□□□□ -0.95
CHD7-207ENST00000527921 PSMD7P51665 324 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 RTL8BQ17RB0 113 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 LCN12Q6JVE5 192 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 Q8N402 240 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 AKIP1Q9NQ31 210 aa9.1□□□□□ -0.95
CHD7-207ENST00000527921 TRAV1-2A0A0B4J238 106 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 ZNF785A8K8V0 405 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 ANKRD65E5RJM6 399 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 CRYZL1O95825 349 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 SAA1P0DJI8 122 aaPredicted RBP9.09□□□□□ -0.95
CHD7-207ENST00000527921 RAB6AP20340 208 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 RHOGP84095 191 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 TNXAQ16473 311 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 RPEL1Q2QD12 228 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 VMA21Q3ZAQ7 101 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 TTC9CQ8N5M4 171 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 OR2K2Q8NGT1 345 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 OSR1Q8TAX0 266 aaPredicted RBP9.09□□□□□ -0.95
CHD7-207ENST00000527921 SNAPC3Q92966 411 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 ADTRPQ96IZ2 230 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 PHB2Q99623 299 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 HIPK2Q9H2X6 1198 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 ZNF430Q9H8G1 570 aaPredicted RBP9.09□□□□□ -0.95
CHD7-207ENST00000527921 RETNQ9HD89 108 aa9.09□□□□□ -0.95
CHD7-207ENST00000527921 ALMS1Q8TCU4 4167 aa9.08□□□□□ -0.96
CHD7-207ENST00000527921 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.08□□□□□ -0.96
CHD7-207ENST00000527921 FAM223BA6NKX1 122 aa9.08□□□□□ -0.96
CHD7-207ENST00000527921 EDN2P20800 178 aa9.08□□□□□ -0.96
CHD7-207ENST00000527921 RANBP1P43487 201 aa9.08□□□□□ -0.96
CHD7-207ENST00000527921 BRWD1-AS2P59051 145 aa9.08□□□□□ -0.96
CHD7-207ENST00000527921 MRPS15P82914 257 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms