RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TP53RKQ96S44 253 aa12.69□□□□□ -0.38
USP47-207ENST00000527733 PTPRSQ13332 1948 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 PERPQ96FX8 193 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 RSRP1Q9BUV0 290 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 IGKV1-27A0A075B6S5 117 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 E9PQ18 207 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 B2MP61769 119 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 SPNS3Q6ZMD2 512 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 DPF1Q92782 380 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 TECRQ9NZ01 308 aaKnown RBP12.68□□□□□ -0.38
USP47-207ENST00000527733 PITX3O75364 302 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 DKK1O94907 266 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 C17orf50Q8WW18 174 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 PITPNC1Q9UKF7 332 aa12.68□□□□□ -0.38
USP47-207ENST00000527733 A0A1W2PNU3 283 aaPredicted RBP12.67□□□□□ -0.38
USP47-207ENST00000527733 ATP6V0CP27449 155 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 ARL3P36405 182 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 RND3P61587 244 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 FAM78BQ5VT40 261 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 FAM166AQ6J272 317 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 OR1L6Q8NGR2 347 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 Q8WTZ3 238 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 NPVFQ9HCQ7 196 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 TRBV6-7A0A0A0MS04 114 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 A0A0A6YYD4 124 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 ZNF737O75373 536 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 SRSF10O75494 262 aaKnown RBP12.67□□□□□ -0.38
USP47-207ENST00000527733 KBTBD11O94819 623 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 OR2C1O95371 312 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 CD1BP29016 333 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 RPL39P5Q59GN2 51 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 PCSK4Q6UW60 755 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
USP47-207ENST00000527733 OR1B1Q8NGR6 318 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 PFDN5Q99471 154 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 RBKSQ9H477 322 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 TNFRSF9Q07011 255 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 NHLRC3Q5JS37 347 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 ZNF497Q6ZNH5 498 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 RPRMLQ8N4K4 120 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 DPM3Q9P2X0 92 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 PROB1E7EW31 1015 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 LDLRAD4O15165 306 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 CXCL2P19875 107 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 TMEM41BQ5BJD5 291 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 TVP23CQ96ET8 276 aa12.67□□□□□ -0.38
USP47-207ENST00000527733 THBDP07204 575 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 UCP1P25874 307 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 HGFACQ04756 655 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 ZNF146Q15072 292 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 NUP37Q8NFH4 326 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 OR52M1Q8NGK5 317 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 TMEM167BQ9NRX6 74 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 PPP5D1E7EU14 171 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 CEACAM8P31997 349 aaPredicted RBP12.66□□□□□ -0.38
USP47-207ENST00000527733 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
USP47-207ENST00000527733 UBE2L3P68036 154 aaKnown RBP12.66□□□□□ -0.38
USP47-207ENST00000527733 ZNF331Q9NQX6 463 aaPredicted RBP12.66□□□□□ -0.38
USP47-207ENST00000527733 PARP11Q9NR21 331 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 GTF3C1Q12789 2109 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 LYNX1G3V0Z9 82 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 KCNAB3O43448 404 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 GOSR1O95249 250 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 SFTA3P0C7M3 94 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 LYNX1P0DP58 116 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 LCN2P80188 198 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 IZUMO4Q1ZYL8 232 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 SLC35B3Q9H1N7 401 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 GAB2Q9UQC2 676 aa12.66□□□□□ -0.38
USP47-207ENST00000527733 DPRXA6NFQ7 191 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 ERVH48-1M5A8F1 160 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 CORTO00230 105 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 HABP2Q14520 560 aaPredicted RBP12.65□□□□□ -0.38
USP47-207ENST00000527733 IGFL2Q6UWQ7 119 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 CHRDL1Q9BU40 450 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 TLNRD1Q9H1K6 362 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 GAR1Q9NY12 217 aaKnown RBP12.65□□□□□ -0.38
USP47-207ENST00000527733 TCF19Q9Y242 345 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 DNM1P46Q6ZS02 220 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 COLCA1Q6ZS62 124 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 OR4X1Q8NH49 305 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 ZNF90Q03938 601 aa12.65□□□□□ -0.38
USP47-207ENST00000527733 RTBDNQ9BSG5 229 aaPredicted RBP12.65□□□□□ -0.38
USP47-207ENST00000527733 SIGLEC5O15389 551 aa12.65□□□□□ -0.39
USP47-207ENST00000527733 TNFSF13O75888 250 aa12.65□□□□□ -0.39
USP47-207ENST00000527733 SLC25A5P05141 298 aaKnown RBP12.65□□□□□ -0.39
USP47-207ENST00000527733 SPP1P10451 314 aa12.65□□□□□ -0.39
USP47-207ENST00000527733 SERF2P84101 59 aa12.65□□□□□ -0.39
USP47-207ENST00000527733 PRR27Q6MZM9 219 aa12.65□□□□□ -0.39
USP47-207ENST00000527733 ZNF429Q86V71 674 aa12.65□□□□□ -0.39
USP47-207ENST00000527733 LYRM2Q9NU23 88 aaPredicted RBP12.65□□□□□ -0.39
USP47-207ENST00000527733 CCL3L1P16619 93 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 OSR1Q8TAX0 266 aaPredicted RBP12.64□□□□□ -0.39
USP47-207ENST00000527733 ZNF106Q9H2Y7 1883 aaKnown RBP12.64□□□□□ -0.39
USP47-207ENST00000527733 XKRY2A2RUG3 117 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 MPDU1O75352 247 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 ACAA1P09110 424 aaPredicted RBP12.64□□□□□ -0.39
USP47-207ENST00000527733 NAT1P18440 290 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 COMPP49747 757 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms