RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PRELID3BQ9Y3B1 194 aa10.97□□□□□ -0.65
CD44-224ENST00000526669 TEX13DA0A0J9YY54 714 aaPredicted RBP10.96□□□□□ -0.65
CD44-224ENST00000526669 SH2D7A6NKC9 451 aaPredicted RBP10.96□□□□□ -0.65
CD44-224ENST00000526669 RNF212BA8MTL3 300 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 MPPED1O15442 326 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 GPR137BO60478 399 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 RAMP3O60896 148 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 TCRBP04435 133 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 FAM106CPP0CH98 169 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 SPNP16150 400 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 SLC6A1P30531 599 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 MC5RP33032 325 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 F2RL1P55085 397 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 UBA52P62987 128 aaKnown RBP10.96□□□□□ -0.65
CD44-224ENST00000526669 CBX3Q13185 183 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 DCTN2Q13561 401 aaKnown RBP10.96□□□□□ -0.65
CD44-224ENST00000526669 NRARPQ7Z6K4 114 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 THNSL2Q86YJ6 484 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 PDPNQ86YL7 162 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 CENPSQ8N2Z9 138 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 TMEM86BQ8N661 226 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 HARBI1Q96MB7 349 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 TP53RKQ96S44 253 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 C20orf85Q9H1P6 137 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 NAA60Q9H7X0 242 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 LIN7CQ9NUP9 197 aaKnown RBP10.96□□□□□ -0.65
CD44-224ENST00000526669 PRR13Q9NZ81 148 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 PITPNC1Q9UKF7 332 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 POMT1Q9Y6A1 747 aa10.96□□□□□ -0.65
CD44-224ENST00000526669 CRYM-AS1A6NIL9 109 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 NCBP2LA6PVI3 153 aaKnown RBP10.95□□□□□ -0.66
CD44-224ENST00000526669 SHOXO15266 292 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 S1PR2O95136 353 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 VSIG10L2P0DP72 767 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 RRASP10301 218 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 RPA2P15927 270 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 ANXA7P20073 488 aaKnown RBP10.95□□□□□ -0.66
CD44-224ENST00000526669 F2RP25116 425 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 KIR2DS2P43631 304 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 LPAR6P43657 344 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 RAB25P57735 213 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 EBI3Q14213 229 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 MMDQ15546 238 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 SP6Q3SY56 376 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 Q8N6K4 173 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 OR4S2Q8NH73 311 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 FLYWCH2Q96CP2 140 aaKnown RBP10.95□□□□□ -0.66
CD44-224ENST00000526669 RBM14Q96PK6 669 aaKnown RBP10.95□□□□□ -0.66
CD44-224ENST00000526669 JMJD8Q96S16 334 aa10.95□□□□□ -0.66
CD44-224ENST00000526669 C3orf85A0A1B0GTC6 90 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 OR2F2O95006 317 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 IFNA2P01563 188 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 OR5AC1P0C628 307 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 TAGLNQ01995 201 aaKnown RBP10.94□□□□□ -0.66
CD44-224ENST00000526669 ZNF585BQ52M93 769 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 TMEM177Q53S58 311 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 SSX9Q7RTT3 188 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 VKORC1L1Q8N0U8 176 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 OR4C13Q8NGP0 309 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 FBXL15Q9H469 300 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 NUDT15Q9NV35 164 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 MOB4Q9Y3A3 225 aa10.94□□□□□ -0.66
CD44-224ENST00000526669 FAM181BA6NEQ2 426 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 SRRM4A7MD48 611 aaKnown RBP10.93□□□□□ -0.66
CD44-224ENST00000526669 H0Y980 276 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 NBR2O15453 112 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 SLC25A17O43808 307 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 IGLV2-23P01705 113 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 RNASE1P07998 156 aaKnown RBP10.93□□□□□ -0.66
CD44-224ENST00000526669 H2AFB2P0C5Z0 115 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 VAMP1P23763 118 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 SUPT4H1P63272 117 aaKnown RBP10.93□□□□□ -0.66
CD44-224ENST00000526669 PPP1R1AQ13522 171 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 C9orf152Q5JTZ5 239 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 DHRS7BQ6IAN0 325 aaPredicted RBP10.93□□□□□ -0.66
CD44-224ENST00000526669 SLC25A42Q86VD7 318 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 PRIMA1Q86XR5 153 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 SGPP2Q8IWX5 399 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 CLCC1Q96S66 551 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 PALMDQ9NP74 551 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 TPSG1Q9NRR2 321 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 PLSCR3Q9NRY6 295 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 KIAA1456Q9P272 454 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 NUBP2Q9Y5Y2 271 aa10.93□□□□□ -0.66
CD44-224ENST00000526669 A0A0A6YYJ9 748 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 TRIM77I1YAP6 450 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 IGKV1-39P01597 117 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 IGKV1D-39P04432 117 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 TAS2R31P59538 309 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 PLGLAQ15195 96 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 PSG5Q15238 335 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 TRIM16LQ309B1 348 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 Q8N9W7 124 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 OR52B4Q8NGK2 314 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 CASTOR1Q8WTX7 329 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 R3HDM4Q96D70 268 aa10.92□□□□□ -0.66
CD44-224ENST00000526669 TSNAXQ99598 290 aaKnown RBP10.92□□□□□ -0.66
CD44-224ENST00000526669 METTL1Q9UBP6 276 aaKnown RBP10.92□□□□□ -0.66
CD44-224ENST00000526669 CLDN34H7C241 214 aa10.91□□□□□ -0.66
CD44-224ENST00000526669 RRHO14718 337 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms