RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TMEM27Q9HBJ8 222 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 MTFP1Q9UDX5 166 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 ZNF229Q9UJW7 825 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 PSG8Q9UQ74 426 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 VPS13BQ7Z7G8 4022 aa3.16□□□□□ -1.9
HMGB1P23-201ENST00000518743 PKHD1L1Q86WI1 4243 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 IGHV3-64DA0A0J9YX35 117 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 H7C1H1 209 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 PHYHO14832 338 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 CST4P01036 141 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 IGLV2-23P01705 113 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 C8GP07360 202 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 RCC1P18754 421 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 SYT1P21579 422 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 DTYMKP23919 212 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 ANP32AP39687 249 aaKnown RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 RANBP1P43487 201 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 RPL31P62899 125 aaKnown RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 PSPHP78330 225 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 TNFAIP6P98066 277 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 IFITM3Q01628 133 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 DGCR6Q14129 220 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF79Q15937 498 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 TAL2Q16559 108 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 RSPO1Q2MKA7 263 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 KRTAP27-1Q3LI81 207 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 C10orf99Q6UWK7 81 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 TMPPEQ6ZT21 453 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 AAED1Q7RTV5 226 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 SPATA24Q86W54 205 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC30A8Q8IWU4 369 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 CPNE9Q8IYJ1 553 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 C19orf18Q8NEA5 215 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR51A7Q8NH64 312 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 RNF138Q8WVD3 245 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 TMEM234Q8WY98 164 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 RNF185Q96GF1 192 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 RDH12Q96NR8 316 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 BIRC8Q96P09 236 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 PPP1R2P1Q96PQ5 205 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 HDHD3Q9BSH5 251 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 FRMD8P1Q9BZ68 369 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLIRPQ9GZT3 109 aaKnown RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 SAV1Q9H4B6 383 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 METTL8Q9H825 291 aaKnown RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 RRAGDQ9NQL2 400 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 SDHAF2Q9NX18 166 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC7A11Q9UPY5 501 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC22A14Q9Y267 594 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 ACOT9Q9Y305 439 aa3.15□□□□□ -1.91
HMGB1P23-201ENST00000518743 IGLV3-32A0A0A0MS00 114 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 A0A0J9YXV3 536 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 A0A1B0GTI1 187 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 C1GALT1C1LP0DN25 315 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 PAX6P26367 422 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 SSTR5P35346 364 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 INSL3P51460 131 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 ERVS71-1P61550 626 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 PAFAH1B2P68402 229 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC35A1P78382 337 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 KLRD1Q13241 179 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 STX3Q13277 289 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF266Q14584 549 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 RGNQ15493 299 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 DEFB136Q30KP8 78 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 TRMT12Q53H54 448 aaKnown RBP3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 C3orf33Q6P1S2 294 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 FAHD1Q6P587 224 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZFP41Q8N8Y5 198 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 C11orf72Q8NBR9 251 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 MNS1Q8NEH6 495 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC26A10Q8NG04 563 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR10AD1Q8NGE0 317 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 OR4D6Q8NGJ1 314 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 CACNG8Q8WXS5 425 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF317Q96PQ6 595 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 QKIQ96PU8 341 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 HSD17B10Q99714 261 aaKnown RBP3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 UQCC2Q9BRT2 126 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 PRRG3Q9BZD7 231 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 RPP21Q9H633 154 aaKnown RBP3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 SPACA1Q9HBV2 294 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 HMG20AQ9NP66 347 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 MAT2BQ9NZL9 334 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 AP3M1Q9Y2T2 418 aa3.14□□□□□ -1.91
HMGB1P23-201ENST00000518743 A0A0U1RQV1 116 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 GOLGA8KD6RF30 607 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 TCAPO15273 167 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC22A5O76082 557 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 RAB36O95755 333 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 IFNA14P01570 189 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 BCHEP06276 602 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 PRPS2P11908 318 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 ZNF35P13682 527 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 SLC6A1P30531 599 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 GNRHRP30968 328 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 LCN1P31025 176 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 RGS6P49758 472 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 CDKN2DP55273 166 aa3.13□□□□□ -1.91
HMGB1P23-201ENST00000518743 BLCAPP62952 87 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms