RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TGIF2-C20orf24A0A0A6YYL0 155 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 TRAV39A0A0B4J263 110 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 MAP1LC3B2A6NCE7 125 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF729A6NN14 1252 aaPredicted RBP9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 YIF1AO95070 293 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 CEACAM6P40199 344 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 SLC38A11Q08AI6 406 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 CATR1Q13166 79 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 LCN15Q6UWW0 184 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 FGFRL1Q8N441 504 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 ZNF645Q8N7E2 425 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 CIB3Q96Q77 187 aaPredicted RBP9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 RSG1Q9BU20 258 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 MAP1LC3BQ9GZQ8 125 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 RALYQ9UKM9 306 aaKnown RBP9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 KCNS2Q9ULS6 477 aa9.21□□□□□ -0.93
SH3RF1-203ENST00000508685 TMEM30CPA0ZSE6 113 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 ZNF737O75373 536 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 CRYAAP02489 173 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 TFF1P04155 84 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 IAPPP10997 89 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 TUBG1P23258 451 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 TNFRSF9Q07011 255 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 SPANXN5Q5MJ07 72 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 ZNF343Q6P1L6 599 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 VHLLQ6RSH7 139 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 DRAM1Q8N682 238 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 OR4C12Q96R67 309 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 MRPL37Q9BZE1 423 aaKnown RBP9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 ZNF665Q9H7R5 613 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 TUBG2Q9NRH3 451 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 HSPB7Q9UBY9 170 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 URGCP-MRPS24S4R325 110 aa9.21□□□□□ -0.94
SH3RF1-203ENST00000508685 TRAV20A0A0B4J274 112 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 CTXND1A0A1B0GTU2 59 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 CEBPZOSA8MTT3 80 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 ATXN7O15265 892 aaPredicted RBP9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 TRGC2P03986 189 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 ZNF16P17020 682 aaPredicted RBP9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 PSMB3P49720 205 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 ARL16Q0P5N6 197 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 ZNF726P1Q15940 193 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 TMEM241Q24JQ0 296 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 SLC35E4Q6ICL7 350 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 WDR82Q6UXN9 313 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 CYP2G1PQ6ZSU1 146 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 PRR18Q8N4B5 295 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 OR2Z1Q8NG97 314 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 FAM216AQ8WUB2 273 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 LHX4Q969G2 390 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 GALMQ96C23 342 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 PFDN5Q99471 154 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 TMEM147Q9BVK8 224 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 CXXC4Q9H2H0 198 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 HES4Q9HCC6 221 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 MANBALQ9NQG1 85 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 PITPNC1Q9UKF7 332 aa9.2□□□□□ -0.94
SH3RF1-203ENST00000508685 OOEPA6NGQ2 149 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 PSPNO60542 156 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 WDR25Q64LD2 544 aaPredicted RBP9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 HAPLN4Q86UW8 402 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 TGIF2LYQ8IUE0 185 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 HIST3H2BBQ8N257 126 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 UBALD1Q8TB05 177 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 ICE1Q9Y2F5 2266 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 NBASA2RRP1 2371 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 RAB29O14966 203 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 KBTBD11O94819 623 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 CLDN1O95832 211 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 HAND1O96004 215 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 TRGC1P0CF51 173 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 MEF2BQ02080 365 aaPredicted RBP9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 FAM209BQ5JX69 171 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 ANAPC16Q96DE5 110 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 BTF3L4Q96K17 158 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 PYGO2Q9BRQ0 406 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 ACTR3CQ9C0K3 210 aaPredicted RBP9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 RBKSQ9H477 322 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 VSIRQ9H7M9 311 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 SRD5A3Q9H8P0 318 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 GFOD1Q9NXC2 390 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 ZNF835Q9Y2P0 537 aa9.19□□□□□ -0.94
SH3RF1-203ENST00000508685 ROS1P08922 2347 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 A0A1B0GWJ7 208 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 LRRC30A6NM36 301 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 IFITM10A6NMD0 228 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 C17orf112F2Z3M2 114 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 P0C879 139 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 HIST1H1BP16401 226 aaKnown RBP9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 IL2RGP31785 369 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 SPRNQ5BIV9 151 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 PYY3Q5JQD4 70 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 OR2B11Q5JQS5 317 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 NCR3LG1Q68D85 454 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 ZNF66Q6ZN08 573 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 OR10P1Q8NGE3 313 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 OR10A7Q8NGE5 316 aa9.18□□□□□ -0.94
SH3RF1-203ENST00000508685 PRR7Q8TB68 274 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms