RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 SLC25A6P12236 298 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 AZU1P20160 251 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 MSR1P21757 451 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 HHEXQ03014 270 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF816Q0VGE8 651 aaPredicted RBP6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 PHYHD1Q5SRE7 291 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 SSX8Q7RTT4 187 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF808Q8N4W9 903 aaPredicted RBP6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 DEFB119Q8N690 84 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 STXBP6Q8NFX7 210 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 OR1F12Q8NHA8 337 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 TSKUQ8WUA8 353 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 PERPQ96FX8 193 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 OR8B2Q96RD0 313 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 SOHLH2Q9NX45 425 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 RNF186Q9NXI6 227 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 PTRH2Q9Y3E5 179 aaKnown RBP6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 H3BUT2 72 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 M0R2Z0 102 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 CLPSP04118 112 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 SRSF7Q16629 238 aaKnown RBP eCLIP6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 LRRC75BQ2VPJ9 315 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 DOK3Q7L591 496 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 TMEM144Q7Z5S9 345 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 FER1L6-AS1Q8NA97 138 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 OR56B2PQ8NGI1 322 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 FAM168AQ92567 244 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 GCM1Q9NP62 436 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 OR1A1Q9P1Q5 309 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 KIAA1549LQ6ZVL6 1849 aa6.14□□□□□ -1.43
LIMCH1-207ENST00000508466 IGKV1-6A0A0C4DH72 117 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 ALG1L2C9J202 215 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 IGKV1-39P01597 117 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 IGKV1D-39P04432 117 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 NBEAP1P0C6P0 100 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 NSDHLQ15738 373 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 RSPO1Q2MKA7 263 aaPredicted RBP6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 VWC2Q2TAL6 325 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 CEACAM21Q3KPI0 293 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 FREM1Q5H8C1 2179 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 SPATA31B1PQ5VZV4 182 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 PRSS57Q6UWY2 283 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF788Q6ZQV5 615 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 LINC00696Q6ZRV3 163 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 BHLHA15Q7RTS1 189 aaPredicted RBP6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 MMD2Q8IY49 270 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 C5orf17Q8NAS9 161 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 TMEM234Q8WY98 164 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 TNFRSF14Q92956 283 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 BORCS8Q96FH0 119 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 P2RX4Q99571 388 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 C19orf25Q9UFG5 118 aaPredicted RBP6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 MUC3AQ02505 3323 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 TRAV1-1A0A0B4J248 108 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 NPIPA3F8WFD2 350 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 RRHO14718 337 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 HAND1O96004 215 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 IGHG1P01857 330 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 TYMSP04818 313 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 G6PCP35575 357 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 MALLQ13021 153 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF77Q15935 545 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 RAET1LQ5VY80 246 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 DNM1P34Q6PK57 102 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 SLC39A11Q8N1S5 342 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 LIPHQ8WWY8 451 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 LINC00479Q96M42 142 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 SPIN2AQ99865 258 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 SPIN2BQ9BPZ2 258 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 FAM234AQ9H0X4 552 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 GPR27Q9NS67 375 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 LAMA5O15230 3695 aa6.13□□□□□ -1.43
LIMCH1-207ENST00000508466 IGHV2-26A0A0B4J1V2 119 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 PDCD6O75340 191 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 ZNF324O75467 553 aaPredicted RBP6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 HSBP1O75506 76 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 BMI1P35226 326 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 FXYD7P58549 80 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 SLAQ13239 276 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 C9orf40Q8IXQ3 194 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 LRTM2Q8N967 370 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 OR8G5Q8NG78 346 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 SF3B5Q9BWJ5 86 aaKnown RBP6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 NPVFQ9HCQ7 196 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 MTCH1Q9NZJ7 389 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 MMP17Q9ULZ9 603 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 DSCAML1Q8TD84 2053 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 YLPM1P49750 1951 aaKnown RBP6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 OBSL1O75147 1896 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 TNCP24821 2201 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 IGHV1-69-2A0A0G2JMI3 117 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 A0A1W2PPV4 95 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 HSPB2A8KAH6 182 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 RNF212BA8MTL3 300 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 CHEK1O14757 476 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 ZG16O60844 167 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 RAMP3O60896 148 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 IGKV1-5P01602 117 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 TFF1P04155 84 aa6.12□□□□□ -1.43
LIMCH1-207ENST00000508466 CSN3P07498 182 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms