RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 FLT4P35916 1363 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 CLIP1P30622 1438 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 ADGRL3Q9HAR2 1447 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 NLRP1Q9C000 1473 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 NWD1Q149M9 1564 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 DEPDC5O75140 1603 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 NHSL1Q5SYE7 1610 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 MYO5CQ9NQX4 1742 aa2.29□□□□□ -2.04
TRAPPC13-208ENST00000505553 M0R381 172 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 FADS1O60427 444 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 FAM228BP0C875 321 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF286BP0CG31 522 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZNF32P17041 273 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 PRPS1L1P21108 318 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 NUP214P35658 2090 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 BLMP54132 1417 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 FGF12P61328 243 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 RBX1P62877 108 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 HOXC5Q00444 222 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 ATP7AQ04656 1500 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 BSPH1Q075Z2 132 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 PRDX4Q13162 271 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 EDDM3AQ14507 147 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 KIF14Q15058 1648 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 PYCR3Q53H96 274 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 KPRPQ5T749 579 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 ZBED9Q6R2W3 1325 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 CCDC121Q6ZUS5 278 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 LRP11Q86VZ4 500 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 BAP18Q8IXM2 172 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 COL27A1Q8IZC6 1860 aaPredicted RBP2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 DEFB125Q8N687 156 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 LY6G5BQ8NDX9 201 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR2D3Q8NGH3 330 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR1L8Q8NGR8 309 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR52B2Q96RD2 323 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 OR52E6Q96RD3 313 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 TLNRD1Q9H1K6 362 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 FAM96AQ9H5X1 160 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 MYO10Q9HD67 2058 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 GLTPQ9NZD2 209 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 SLC23A2Q9UGH3 650 aa2.28□□□□□ -2.04
TRAPPC13-208ENST00000505553 ANKRD12Q6UB98 2062 aa2.28□□□□□ -2.05
TRAPPC13-208ENST00000505553 DOCK8Q8NF50 2099 aa2.28□□□□□ -2.05
TRAPPC13-208ENST00000505553 SCN1AP35498 2009 aa2.28□□□□□ -2.05
TRAPPC13-208ENST00000505553 SCAF11Q99590 1463 aaKnown RBP2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 ZFYVE9O95405 1425 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 MIA2Q96PC5 1412 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 CHP2O43745 196 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 SLC25A20O43772 301 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 APOMO95445 188 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 IGKV3-11P04433 115 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 HLA-DQB2P05538 268 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 CRABP1P29762 137 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 MAP2K4P45985 399 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 LINC00315P59091 139 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 TAS2R45P59539 299 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 IFITM2Q01629 132 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 GLO1Q04760 184 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 OR8G1Q15617 311 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 LGALSLQ3ZCW2 172 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 DNLZQ5SXM8 178 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 C1orf194Q5T5A4 169 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 DEFB132Q7Z7B7 95 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 TMEM86BQ8N661 226 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 ZNF680Q8NEM1 530 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 OR51D1Q8NGF3 324 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 CD200R1Q8TD46 325 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 DCUN1D1Q96GG9 259 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 TAS2R1Q9NYW7 299 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 HHLA2Q9UM44 414 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 CARHSP1Q9Y2V2 147 aaKnown RBP2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 CABIN1Q9Y6J0 2220 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 TICRRQ7Z2Z1 1910 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 BRWD3Q6RI45 1802 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 STRCP1A6NGW2 1772 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 THSD7AQ9UPZ6 1657 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 A2MP01023 1474 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 PZPP20742 1482 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 DOCK9Q9BZ29 2069 aa2.27□□□□□ -2.05
TRAPPC13-208ENST00000505553 TTC21AQ8NDW8 1320 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 LRCOL1A6NCL2 159 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 SMIM9A6NGZ8 99 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 EEF1E1-BLOC1S5C9J1V9 151 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 PSMD12O00232 456 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 RTL8CO15255 209 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 DAPP51397 102 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 KLF3P57682 345 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 PSME3P61289 254 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 PMAIP1Q13794 54 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 TMEM97Q5BJF2 176 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 FAM201AQ5SY85 155 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 ADM2Q7Z4H4 148 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 CALHM3Q86XJ0 350 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 ZFAND2AQ8N6M9 145 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 OR2T27Q8NH04 317 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 ZNF721Q8TF20 911 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 SLC25A44Q96H78 314 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 C9orf16Q9BUW7 83 aa2.26□□□□□ -2.05
TRAPPC13-208ENST00000505553 NKX6-2Q9C056 277 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms