RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 GZMHP20718 246 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 ICAM4Q14773 271 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 C3orf36Q3SXR2 165 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 BTNL3Q6UXE8 466 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 LRP11Q86VZ4 500 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 C22orf15Q8WYQ4 148 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 AGMATQ9BSE5 352 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 WDR61Q9GZS3 305 aaKnown RBP12.32□□□□□ -0.44
CHTOP-206ENST00000495554 RPRMQ9NS64 109 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 PUS1Q9Y606 427 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHTOP-206ENST00000495554 IGKV1D-17A0A075B6S4 117 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 A0A1W2PN81 502 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 ODAMA1E959 279 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 M0R1B8 84 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 UBE2CO00762 179 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 SLC25A17O43808 307 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 CHRNA7P36544 502 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 EDDM3AQ14507 147 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 KHDC3LQ587J8 217 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 C22orf34Q6ZV56 151 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 PPP1R35Q8TAP8 253 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 C2CD4CQ8TF44 421 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 MUCL1Q96DR8 90 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 PSG11Q9UQ72 335 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 CACNA1DQ01668 2161 aa12.32□□□□□ -0.44
CHTOP-206ENST00000495554 IGHV3-43A0A0B4J1X8 118 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 IGHV3-43DP0DP04 118 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 DAOP14920 347 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 EGR1P18146 543 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 GLRXP35754 106 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 RAB5BP61020 215 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 SLC38A11Q08AI6 406 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 FAM57AQ8TBR7 257 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 OR4C12Q96R67 309 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 TXN2Q99757 166 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 MKRN2OSH3BPM6 223 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 RAB29O14966 203 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 KLF3P57682 345 aaPredicted RBP12.31□□□□□ -0.44
CHTOP-206ENST00000495554 MRPS11P82912 194 aaKnown RBP12.31□□□□□ -0.44
CHTOP-206ENST00000495554 H2BFWTQ7Z2G1 175 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 MBD3L1Q8WWY6 194 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 ISOC2Q96AB3 205 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 PINX1Q96BK5 328 aaKnown RBP12.31□□□□□ -0.44
CHTOP-206ENST00000495554 R3HDM4Q96D70 268 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 SNX22Q96L94 193 aa12.31□□□□□ -0.44
CHTOP-206ENST00000495554 CHD3Q12873 2000 aaKnown RBP12.31□□□□□ -0.44
CHTOP-206ENST00000495554 DEFB108AA8MXU0 73 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 MGST3O14880 152 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 IFNA10P01566 189 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 SNRPEP62304 92 aaKnown RBP12.3□□□□□ -0.44
CHTOP-206ENST00000495554 ZNF674Q2M3X9 581 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 GCSAMQ8N6F7 178 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 TAF15Q92804 592 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHTOP-206ENST00000495554 OR2V2Q96R30 315 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 DCTN5Q9BTE1 182 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 GAL3ST2Q9H3Q3 398 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 PIEZO2Q9H5I5 2752 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 LINC00473A8K010 186 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 H3BQ15 152 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 NKX6-1P78426 367 aaPredicted RBP12.3□□□□□ -0.44
CHTOP-206ENST00000495554 FOXC1Q12948 553 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 CR1LQ2VPA4 569 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 OR8G2PQ6IF36 304 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 CYB561D1Q8N8Q1 229 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 CIB3Q96Q77 187 aaPredicted RBP12.3□□□□□ -0.44
CHTOP-206ENST00000495554 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 JPT1Q9UK76 154 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 NBEAQ8NFP9 2946 aa12.3□□□□□ -0.44
CHTOP-206ENST00000495554 C1orf196B1AJZ1 125 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 ATP6V1FQ16864 119 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 VHLLQ6RSH7 139 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 SPNS3Q6ZMD2 512 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 ZFP82Q8N141 532 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 SFXN3Q9BWM7 321 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 GSX1Q9H4S2 264 aaPredicted RBP12.29□□□□□ -0.44
CHTOP-206ENST00000495554 VSIRQ9H7M9 311 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 GNG12Q9UBI6 72 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 USF3Q68DE3 2245 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 ZGRF1Q86YA3 2104 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 UBE2L5PA0A1B0GUS4 154 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 LOC102723971A0A1B0GUV8 181 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 A0A1W2PPH5 198 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 TMEM238C9JI98 176 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 CDC34P49427 236 aaPredicted RBP12.29□□□□□ -0.44
CHTOP-206ENST00000495554 TDGF1P3P51864 188 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 CEBPGP53567 150 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 FAM27E3Q08E93 113 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 ZNF787Q6DD87 383 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 Q8NA96 180 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 SCNM1Q9BWG6 230 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 CEP295Q9C0D2 2601 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 GNG13Q9P2W3 67 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 CLN8Q9UBY8 286 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 TIMM9Q9Y5J7 89 aa12.29□□□□□ -0.44
CHTOP-206ENST00000495554 IGLV3-9A0A075B6K5 115 aa12.28□□□□□ -0.44
CHTOP-206ENST00000495554 C5orf52A6NGY3 159 aa12.28□□□□□ -0.44
CHTOP-206ENST00000495554 GPR12P47775 334 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms