RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 EIF4EBP1Q13541 118 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-214ENST00000495485 ZNF266Q14584 549 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 RTL8BQ17RB0 113 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 ZNF585BQ52M93 769 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 Q5PR19 223 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 TMEM200BQ69YZ2 307 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 DHRS7BQ6IAN0 325 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-214ENST00000495485 BTNL3Q6UXE8 466 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 SLC25A48Q6ZT89 311 aaKnown RBP8.44□□□□□ -1.06
HDAC3-214ENST00000495485 STX12Q86Y82 276 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 TGIF2LYQ8IUE0 185 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 LYG1Q8N1E2 194 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 OR2C3Q8N628 320 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 DMBX1Q8NFW5 382 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 TNFRSF14Q92956 283 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 TMEM186Q96B77 213 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 PERPQ96FX8 193 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 PARP12Q9H0J9 701 aaKnown RBP8.44□□□□□ -1.06
HDAC3-214ENST00000495485 DCAF16Q9NXF7 216 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 PFDN2Q9UHV9 154 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 WSB1Q9Y6I7 421 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 SESN1Q9Y6P5 492 aa8.44□□□□□ -1.06
HDAC3-214ENST00000495485 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
HDAC3-214ENST00000495485 LINC00862A6NCI5 91 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 SYNGR2O43760 224 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 SSSCA1O60232 199 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 FCGR3BO75015 233 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 PITX3O75364 302 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 RBMXL2O75526 392 aaKnown RBP8.43□□□□□ -1.06
HDAC3-214ENST00000495485 KRASP01116 189 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 APOA2P02652 100 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 NQO2P16083 231 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 CAV2P51636 162 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 ZNF816Q0VGE8 651 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-214ENST00000495485 CT45A1Q5HYN5 189 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 ALKAL2Q6UX46 152 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 LYPD2Q6UXB3 125 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 LINC00311Q8N616 119 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 CT45A3Q8NHU0 189 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 RNF141Q8WVD5 230 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 PIMREGQ9BSJ6 248 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 C19orf12Q9NSK7 152 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 LYRM2Q9NU23 88 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-214ENST00000495485 CACNG5Q9UF02 275 aa8.43□□□□□ -1.06
HDAC3-214ENST00000495485 YLPM1P49750 1951 aaKnown RBP8.42□□□□□ -1.06
HDAC3-214ENST00000495485 MARCH11A6NNE9 402 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 C17orf98A8MV24 154 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 CHST1O43916 411 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 DFFBO76075 338 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 IGKV1-39P01597 117 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 IGHV4-39P01824 125 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 IGKV1D-39P04432 117 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 LIPFP07098 398 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 GPR6P46095 362 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-214ENST00000495485 GNG10P50151 68 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 POLR2GP62487 172 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC3-214ENST00000495485 GNB2P62879 340 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 HBG1P69891 147 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 HBG2P69892 147 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 ZNF273Q14593 569 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 CLEC12BQ2HXU8 276 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 MIDNQ504T8 468 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 PRAMEF5Q5TYX0 476 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 DUX4L9Q6RFH8 374 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-214ENST00000495485 UBAC2Q8NBM4 344 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 ZNF439Q8NDP4 499 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 OR10X1Q8NGY0 326 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 OR4A16Q8NH70 328 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 OR9G1Q8NH87 305 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 C8orf46Q8TAG6 207 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 FAM168AQ92567 244 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 R3HDM4Q96D70 268 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 SMIM8Q96KF7 97 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 FAM210AQ96ND0 272 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 GPHA2Q96T91 129 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 IFI27L2Q9H2X8 130 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 MED9Q9NWA0 146 aa8.42□□□□□ -1.06
HDAC3-214ENST00000495485 AMMECR1Q9Y4X0 333 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-214ENST00000495485 NAV3Q8IVL0 2385 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 A0A087X0M5 115 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 PPIAL4CA0A0B4J2A2 164 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 A0A1B0GX30 115 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 MEX3AA1L020 520 aaKnown RBP8.41□□□□□ -1.06
HDAC3-214ENST00000495485 LINC00473A8K010 186 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 NUDT19A8MXV4 375 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 J3QR06 171 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 S1PR2O95136 353 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 CFDP00746 253 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-214ENST00000495485 IGKV1-5P01602 117 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 PPIAL4GP0DN37 164 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 MC5RP33032 325 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 G6PCP35575 357 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 ZNF134P52741 427 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 ERVFRD-1P60508 538 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 UBE2KP61086 200 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 RPL30P62888 115 aaKnown RBP8.41□□□□□ -1.06
HDAC3-214ENST00000495485 BLOC1S1P78537 153 aa8.41□□□□□ -1.06
HDAC3-214ENST00000495485 EWSR1Q01844 656 aaKnown RBP eCLIP8.41□□□□□ -1.06
HDAC3-214ENST00000495485 CXorf66Q5JRM2 361 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-214ENST00000495485 NCR3LG1Q68D85 454 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms