RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 NIPBLQ6KC79 2804 aaeCLIP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 HERC2O95714 4834 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 CPS1P31327 1500 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 HERC1Q15751 4861 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 SPTAN1Q13813 2472 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 DAPL1A0PJW8 107 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 LINC00862A6NCI5 91 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 IQCF5A8MTL0 148 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 MKRN2OSH3BPM6 223 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 M0QX08 132 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 ARL6IP5O75915 188 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 ATP6V1G2O95670 118 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 SOD1P00441 154 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 ASS1P00966 412 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 HBZP02008 142 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 PET100P0DJ07 73 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 SLC25A16P16260 332 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 CFL1P23528 166 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 ATP6V0CP27449 155 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 OR1E2P47887 323 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 SLAMF1Q13291 335 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 PDGFRLQ15198 375 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 DNAL1Q4LDG9 190 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 FAM45BPQ6NSW5 357 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 XKRXQ6PP77 449 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 Q6ZTI0 123 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 BOD1L2Q8IYS8 172 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 C10orf126Q8N4M7 172 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 NATD1Q8N6N6 113 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 ZNF283Q8N7M2 679 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 OR51H1Q8NH63 302 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 OR10A6Q8NH74 314 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 TNFAIP8L1Q8WVP5 186 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 MRPS24Q96EL2 167 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 ABHD14BQ96IU4 210 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 TRNT1Q96Q11 434 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 PECRQ9BY49 303 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 EIF5A2Q9GZV4 153 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 C11orf1Q9H5F2 150 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 UBQLN4Q9NRR5 601 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 DMXL2Q8TDJ6 3036 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 UTP20O75691 2785 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 PLCH2O75038 1416 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 ANKHD1Q8IWZ3 2542 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 COL6A6A6NMZ7 2263 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 NUP188Q5SRE5 1749 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 ARHGEF28Q8N1W1 1705 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 TNS1Q9HBL0 1735 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 NUP153P49790 1475 aaKnown RBP0.86□□□□□ -2.27
ITGB1-216ENST00000493758 RALGAPBQ86X10 1494 aa0.86□□□□□ -2.27
ITGB1-216ENST00000493758 TLN1Q9Y490 2541 aaKnown RBP0.85□□□□□ -2.27
ITGB1-216ENST00000493758 ZANQ9Y493 2812 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 DCAF1Q9Y4B6 1507 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 SHPRHQ149N8 1683 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 RREB1Q92766 1687 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 PRRC2CQ9Y520 2896 aaKnown RBP0.85□□□□□ -2.27
ITGB1-216ENST00000493758 LINC00854A0A1B0GVQ3 168 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 TMEM213A2RRL7 107 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 VPS37CA5D8V6 355 aaPredicted RBP0.85□□□□□ -2.27
ITGB1-216ENST00000493758 SMLR1H3BR10 107 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 COPEO14579 308 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 TOX3O15405 576 aaPredicted RBP0.85□□□□□ -2.27
ITGB1-216ENST00000493758 SCN2BO60939 215 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 LY6HO94772 140 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 BRI3O95415 125 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 TGP01266 2768 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 OR13C7P0DN81 318 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 CDK2P24941 298 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 LAMA1P25391 3075 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 CASQ1P31415 396 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 CD200P41217 278 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 DAD1P61803 113 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 RASL11AQ6T310 242 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 BLIDQ8IZY5 108 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 YIPF7Q8N8F6 280 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 TMEM75Q8N9X5 138 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 CCDC112Q8NEF3 446 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 LFNGQ8NES3 379 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 OR11H1Q8NG94 326 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 OR52E4Q8NGH9 312 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 LHFPL5Q8TAF8 219 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 STOML3Q8TAV4 291 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 CYGBQ8WWM9 190 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 RBP7Q96R05 134 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 OR7D2Q96RA2 312 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 GPR22Q99680 433 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 DCUN1D5Q9BTE7 237 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 BBS2Q9BXC9 721 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 MED28Q9H204 178 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 SPACA1Q9HBV2 294 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 BABAM2Q9NXR7 383 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 CFAP45Q9UL16 551 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 SNX12Q9UMY4 172 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 FAM215AQ9Y5M1 114 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 GMEB1Q9Y692 573 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 DNMT1P26358 1616 aaKnown RBP0.85□□□□□ -2.27
ITGB1-216ENST00000493758 ZCCHC11Q5TAX3 1644 aaKnown RBP0.85□□□□□ -2.27
ITGB1-216ENST00000493758 CCDC180Q9P1Z9 1646 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 CLUHO75153 1309 aa0.85□□□□□ -2.27
ITGB1-216ENST00000493758 DLC1Q96QB1 1528 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms