RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 PTHLHP12272 177 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 PPIFP30405 207 aaKnown RBP15.76■□□□□ 0.11
VPS36-204ENST00000480923 MYCNOSP40205 109 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 TAGLNQ01995 201 aaKnown RBP15.76■□□□□ 0.11
VPS36-204ENST00000480923 RTL8BQ17RB0 113 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 TMEM69Q5SWH9 247 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 KPRPQ5T749 579 aaPredicted RBP15.76■□□□□ 0.11
VPS36-204ENST00000480923 TMEM65Q6PI78 240 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 MRPL41Q8IXM3 137 aaKnown RBP15.76■□□□□ 0.11
VPS36-204ENST00000480923 LINC00482Q8N8I6 264 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 ADTRPQ96IZ2 230 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 HARBI1Q96MB7 349 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 DUX3Q96PT4 197 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 RABL2AQ9UBK7 228 aaPredicted RBP15.76■□□□□ 0.11
VPS36-204ENST00000480923 RABL2BQ9UNT1 228 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 FBXO7Q9Y3I1 522 aa15.76■□□□□ 0.11
VPS36-204ENST00000480923 TPPPO94811 219 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 CA2P00918 260 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 HLA-DQB1P01920 261 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 FCER2P06734 321 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 RRASP10301 218 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 PSMB8P28062 276 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 DUTP33316 252 aaKnown RBP15.75■□□□□ 0.11
VPS36-204ENST00000480923 CDX1P47902 265 aaPredicted RBP15.75■□□□□ 0.11
VPS36-204ENST00000480923 LGALS7P47929 136 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 SPANXN2Q5MJ10 180 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 HOGA1Q86XE5 327 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 ZNF645Q8N7E2 425 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 C15orf40Q8WUR7 153 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 RCC1LQ96I51 464 aaKnown RBP15.75■□□□□ 0.11
VPS36-204ENST00000480923 TPSG1Q9NRR2 321 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 NOTCH1P46531 2555 aa15.75■□□□□ 0.11
VPS36-204ENST00000480923 FABP12A6NFH5 140 aa15.74■□□□□ 0.11
VPS36-204ENST00000480923 SHOXO15266 292 aa15.74■□□□□ 0.11
VPS36-204ENST00000480923 PRB2P02812 416 aaPredicted RBP15.74■□□□□ 0.11
VPS36-204ENST00000480923 CBX5P45973 191 aa15.74■□□□□ 0.11
VPS36-204ENST00000480923 CRIP2P52943 208 aaPredicted RBP15.74■□□□□ 0.11
VPS36-204ENST00000480923 TMEM267Q0VDI3 215 aaPredicted RBP15.74■□□□□ 0.11
VPS36-204ENST00000480923 ZNF562Q6V9R5 426 aa15.74■□□□□ 0.11
VPS36-204ENST00000480923 CCDC190Q86UF4 302 aa15.74■□□□□ 0.11
VPS36-204ENST00000480923 FAM103A1Q9BTL3 118 aaKnown RBP15.74■□□□□ 0.11
VPS36-204ENST00000480923 KLK15Q9H2R5 256 aa15.74■□□□□ 0.11
VPS36-204ENST00000480923 MRPS7Q9Y2R9 242 aaKnown RBP15.74■□□□□ 0.11
VPS36-204ENST00000480923 PLXNB1O43157 2135 aa15.74■□□□□ 0.11
VPS36-204ENST00000480923 IGKV1D-13A0A0B4J2D9 117 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 A0A1W2PN81 502 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 MEIS3P1A6NDR6 274 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 LINC00473A8K010 186 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 CCL24O00175 119 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 TUSC2O75896 110 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 SLC22A5O76082 557 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 IGLV1-40P01703 118 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 IGLV2-23P01705 113 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 IGKV1-13P0DP09 117 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 CHRNA7P36544 502 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 ETV6P41212 452 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 RAB25P57735 213 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 TAS2R20P59543 309 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 DEFB136Q30KP8 78 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 TMEM177Q53S58 311 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 PPP1R27Q86WC6 154 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 MINDY2Q8NBR6 621 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 DDB2Q92466 427 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 RAX2Q96IS3 184 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 P2RX4Q99571 388 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 IFT46Q9NQC8 304 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 NECAP2Q9NVZ3 263 aa15.73■□□□□ 0.11
VPS36-204ENST00000480923 FOXA2Q9Y261 457 aaPredicted RBP15.73■□□□□ 0.11
VPS36-204ENST00000480923 RBMX2Q9Y388 322 aaKnown RBP15.73■□□□□ 0.11
VPS36-204ENST00000480923 DUS4LO95620 317 aaKnown RBP15.72■□□□□ 0.11
VPS36-204ENST00000480923 CRYZL1O95825 349 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 EGR2P11161 476 aaPredicted RBP15.72■□□□□ 0.11
VPS36-204ENST00000480923 GNB1P62873 340 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 IL18Q14116 193 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 FXYD3Q14802 87 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 PYHIN1Q6K0P9 492 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 UNQ5815/PRO19632Q6UWF5 114 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 TCTEX1D1Q8N7M0 179 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 GRPEL2Q8TAA5 225 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 C4orf3Q8WVX3 66 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 S100ZQ8WXG8 99 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 ARPC1AQ92747 370 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 NUBP2Q9Y5Y2 271 aa15.72■□□□□ 0.11
VPS36-204ENST00000480923 CNIH1O95406 144 aa15.71■□□□□ 0.11
VPS36-204ENST00000480923 PTBP1P26599 531 aaKnown RBP eCLIP15.71■□□□□ 0.11
VPS36-204ENST00000480923 FCGR2CP31995 323 aa15.71■□□□□ 0.11
VPS36-204ENST00000480923 RAB9AP51151 201 aa15.71■□□□□ 0.11
VPS36-204ENST00000480923 ZNF45Q02386 682 aa15.71■□□□□ 0.11
VPS36-204ENST00000480923 C19orf54Q5BKX5 351 aa15.71■□□□□ 0.11
VPS36-204ENST00000480923 KCTD9Q7L273 389 aa15.71■□□□□ 0.11
VPS36-204ENST00000480923 MYOZ3Q8TDC0 251 aa15.71■□□□□ 0.11
VPS36-204ENST00000480923 SOSTQ9BQB4 213 aa15.71■□□□□ 0.11
VPS36-204ENST00000480923 PRELID3BQ9Y3B1 194 aa15.71■□□□□ 0.11
VPS36-204ENST00000480923 SRRM4A7MD48 611 aaKnown RBP15.7■□□□□ 0.1
VPS36-204ENST00000480923 FCGR3BO75015 233 aa15.7■□□□□ 0.1
VPS36-204ENST00000480923 AADACP22760 399 aa15.7■□□□□ 0.1
VPS36-204ENST00000480923 PJVKQ0ZLH3 352 aa15.7■□□□□ 0.1
VPS36-204ENST00000480923 VMA21Q3ZAQ7 101 aa15.7■□□□□ 0.1
VPS36-204ENST00000480923 ACTBL2Q562R1 376 aa15.7■□□□□ 0.1
VPS36-204ENST00000480923 SNX29P2Q8IUI4 249 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms