RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 SPAG16Q8N0X2 631 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 ADAD2Q8NCV1 583 aaKnown RBP8.15□□□□□ -1.1
UPF2-204ENST00000460569 OR4S2Q8NH73 311 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 TMEM230Q96A57 120 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 FLYWCH2Q96CP2 140 aaKnown RBP8.15□□□□□ -1.1
UPF2-204ENST00000460569 SLC25A33Q9BSK2 321 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 CHIAQ9BZP6 476 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 NAA60Q9H7X0 242 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 NUDT15Q9NV35 164 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 FLVCR2Q9UPI3 526 aa8.15□□□□□ -1.1
UPF2-204ENST00000460569 TRAV6A0A075B6T7 132 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 A0A0A6YYJ9 748 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 C3orf85A0A1B0GTC6 90 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 CRYM-AS1A6NIL9 109 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 H0Y980 276 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 SHOXO15266 292 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 CHST1O43916 411 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 RAMP3O60896 148 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 IFNA2P01563 188 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 VAMP1P23763 118 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 TAS2R31P59538 309 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 RPS16P62249 146 aaKnown RBP8.14□□□□□ -1.11
UPF2-204ENST00000460569 EBI3Q14213 229 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 MMDQ15546 238 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 SGPP2Q8IWX5 399 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 OR4C13Q8NGP0 309 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 CD300LFQ8TDQ1 290 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 HARBI1Q96MB7 349 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 MOB4Q9Y3A3 225 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 NUBP2Q9Y5Y2 271 aa8.14□□□□□ -1.11
UPF2-204ENST00000460569 NCBP2LA6PVI3 153 aaKnown RBP8.13□□□□□ -1.11
UPF2-204ENST00000460569 CLDN34H7C241 214 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 RBFOX2O43251 390 aaKnown RBP eCLIP8.13□□□□□ -1.11
UPF2-204ENST00000460569 GPR137BO60478 399 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 OR2F2O95006 317 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 S1PR2O95136 353 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 PTTG1O95997 202 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 H2AFB2P0C5Z0 115 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 OR5AC1P0C628 307 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 ANXA7P20073 488 aaKnown RBP8.13□□□□□ -1.11
UPF2-204ENST00000460569 CNTFRP26992 372 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 BRWD1-AS2P59051 145 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 UBA52P62987 128 aaKnown RBP8.13□□□□□ -1.11
UPF2-204ENST00000460569 TRIM16LQ309B1 348 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 SP6Q3SY56 376 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 TMEM177Q53S58 311 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 TMEM128Q5BJH2 165 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 C11orf88Q6PI97 169 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 PLET1Q6UQ28 207 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 CCBE1Q6UXH8 406 aaPredicted RBP8.13□□□□□ -1.11
UPF2-204ENST00000460569 LIAT1Q6ZQX7 453 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 SLC25A42Q86VD7 318 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 LURAP1LQ8IV03 231 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 Q8N6K4 173 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 TCTEX1D1Q8N7M0 179 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 OSR1Q8TAX0 266 aaPredicted RBP8.13□□□□□ -1.11
UPF2-204ENST00000460569 RITA1Q96K30 269 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 RBM14Q96PK6 669 aaKnown RBP8.13□□□□□ -1.11
UPF2-204ENST00000460569 TP53RKQ96S44 253 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 TSNAXQ99598 290 aaKnown RBP8.13□□□□□ -1.11
UPF2-204ENST00000460569 BEX1Q9HBH7 125 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 RAB18Q9NP72 206 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 KIAA1456Q9P272 454 aa8.13□□□□□ -1.11
UPF2-204ENST00000460569 NBR2O15453 112 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 B3GALNT1O75752 331 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 HPRT1P00492 218 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 SERPINE2P07093 398 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 RNASE1P07998 156 aaKnown RBP8.12□□□□□ -1.11
UPF2-204ENST00000460569 VSIG10L2P0DP72 767 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 ANXA3P12429 323 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 SPNP16150 400 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 LPAR6P43657 344 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 F2RL1P55085 397 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 RAB25P57735 213 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 UBE2MP61081 183 aaKnown RBP8.12□□□□□ -1.11
UPF2-204ENST00000460569 SUPT4H1P63272 117 aaKnown RBP8.12□□□□□ -1.11
UPF2-204ENST00000460569 SRSF2Q01130 221 aaKnown RBP8.12□□□□□ -1.11
UPF2-204ENST00000460569 PPP1R1AQ13522 171 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 PLGLAQ15195 96 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 RGS21Q2M5E4 152 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 VMA21Q3ZAQ7 101 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 C4orf46Q504U0 113 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 ZNF585BQ52M93 769 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 C16orf82Q7Z2V1 217 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 OR8H1Q8NGG4 311 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 RNF5Q99942 180 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 PLEKHA2Q9HB19 425 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 FAM212BQ9NTI7 297 aaPredicted RBP8.12□□□□□ -1.11
UPF2-204ENST00000460569 C1RLQ9NZP8 487 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 COMMD9Q9P000 198 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 KCNIP3Q9Y2W7 256 aa8.12□□□□□ -1.11
UPF2-204ENST00000460569 TRIM77I1YAP6 450 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 SLC25A17O43808 307 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 SPDEFO95238 335 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 HRASP01112 189 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 HLA-AP01891 365 aaKnown RBP8.11□□□□□ -1.11
UPF2-204ENST00000460569 SAA1P0DJI8 122 aaPredicted RBP8.11□□□□□ -1.11
UPF2-204ENST00000460569 RPA2P15927 270 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 UCP1P25874 307 aa8.11□□□□□ -1.11
UPF2-204ENST00000460569 LGALS7P47929 136 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms