RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 LINC00473A8K010 186 aa14.64□□□□□ -0.07
COL5A1-203ENST00000460264 SHOXO15266 292 aa14.64□□□□□ -0.07
COL5A1-203ENST00000460264 RAMP3O60896 148 aa14.64□□□□□ -0.07
COL5A1-203ENST00000460264 CTXN2P0C2S0 81 aa14.64□□□□□ -0.07
COL5A1-203ENST00000460264 RRASP10301 218 aa14.64□□□□□ -0.07
COL5A1-203ENST00000460264 DUTP33316 252 aaKnown RBP14.64□□□□□ -0.07
COL5A1-203ENST00000460264 TPPP2P59282 170 aa14.64□□□□□ -0.07
COL5A1-203ENST00000460264 IDNKQ5T6J7 187 aa14.64□□□□□ -0.07
COL5A1-203ENST00000460264 TNCP24821 2201 aa14.64□□□□□ -0.07
COL5A1-203ENST00000460264 SRRM4A7MD48 611 aaKnown RBP14.63□□□□□ -0.07
COL5A1-203ENST00000460264 CNIH1O95406 144 aa14.63□□□□□ -0.07
COL5A1-203ENST00000460264 NFYAP23511 347 aaPredicted RBP14.63□□□□□ -0.07
COL5A1-203ENST00000460264 CNIH2Q6PI25 160 aa14.63□□□□□ -0.07
COL5A1-203ENST00000460264 ZNF645Q8N7E2 425 aa14.63□□□□□ -0.07
COL5A1-203ENST00000460264 MS4A10Q96PG2 267 aa14.63□□□□□ -0.07
COL5A1-203ENST00000460264 SLA2Q9H6Q3 261 aa14.63□□□□□ -0.07
COL5A1-203ENST00000460264 OR2W1Q9Y3N9 320 aa14.63□□□□□ -0.07
COL5A1-203ENST00000460264 IGHV4OR15-8A0A075B7B6 117 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 A0A087WW49 117 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 J3QRK9 145 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 CRYZL1O95825 349 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 IGHV3-11P01762 117 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 HLA-DQB1P01920 261 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 CD40LGP29965 261 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 DCTN2Q13561 401 aaKnown RBP14.62□□□□□ -0.07
COL5A1-203ENST00000460264 MRGPRG-AS1Q2M3A8 158 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 DCUN1D4Q92564 292 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 ANXA10Q9UJ72 324 aa14.62□□□□□ -0.07
COL5A1-203ENST00000460264 IGKV1D-13A0A0B4J2D9 117 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 LINC01619G3V211 115 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 OVOL1O14753 267 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 TRGV3P03979 118 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 IGKV1-13P0DP09 117 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 ECI1P42126 302 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 SLURP1P55000 103 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 UBE2KP61086 200 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 TIMM50Q3ZCQ8 353 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 POC5Q8NA72 575 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 PRR25Q96S07 402 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 B9D2Q9BPU9 175 aa14.61□□□□□ -0.07
COL5A1-203ENST00000460264 TRAV18A0A075B6X5 111 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 A0A0A6YYH2 397 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 A6NJ64 397 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 H3BUA1 57 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 IGLV2-14P01704 120 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 TGFBR1P36897 503 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 INSL3P51460 131 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 CD69Q07108 199 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 VMA21Q3ZAQ7 101 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 KCTD9Q7L273 389 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 TEX45Q8NA69 505 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 OR5T1Q8NG75 326 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 OSR1Q8TAX0 266 aaPredicted RBP14.6□□□□□ -0.07
COL5A1-203ENST00000460264 DLX4Q92988 240 aaPredicted RBP14.6□□□□□ -0.07
COL5A1-203ENST00000460264 RHOVQ96L33 236 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 SPATA2Q9UM82 520 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 RBMX2Q9Y388 322 aaKnown RBP14.6□□□□□ -0.07
COL5A1-203ENST00000460264 SORL1Q92673 2214 aa14.6□□□□□ -0.07
COL5A1-203ENST00000460264 TMEM127O75204 238 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 TUSC2O75896 110 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 SLC22A5O76082 557 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 PRSS8Q16651 343 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 IDO2Q6ZQW0 420 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 OVCH2Q7RTZ1 564 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 BEST4Q8NFU0 473 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 TSPAN14Q8NG11 270 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 YIPF6Q96EC8 236 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 TMEM68Q96MH6 324 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 ZNF355PQ9NSJ1 428 aa14.59□□□□□ -0.07
COL5A1-203ENST00000460264 ZNF256Q9Y2P7 627 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-203ENST00000460264 A0A087WXM4 84 aa14.58□□□□□ -0.08
COL5A1-203ENST00000460264 FCGR3BO75015 233 aa14.58□□□□□ -0.08
COL5A1-203ENST00000460264 TNFAIP8O95379 198 aa14.58□□□□□ -0.08
COL5A1-203ENST00000460264 HSPB1P04792 205 aaKnown RBP14.58□□□□□ -0.08
COL5A1-203ENST00000460264 RPL30P62888 115 aaKnown RBP14.58□□□□□ -0.08
COL5A1-203ENST00000460264 C11orf87Q6NUJ2 197 aa14.58□□□□□ -0.08
COL5A1-203ENST00000460264 ZNF429Q86V71 674 aa14.58□□□□□ -0.08
COL5A1-203ENST00000460264 GVQW1Q8N7I0 195 aa14.58□□□□□ -0.08
COL5A1-203ENST00000460264 AUNIPQ9H7T9 357 aa14.58□□□□□ -0.08
COL5A1-203ENST00000460264 VCX3AQ9NNX9 186 aa14.58□□□□□ -0.08
COL5A1-203ENST00000460264 PRELID3BQ9Y3B1 194 aa14.58□□□□□ -0.08
COL5A1-203ENST00000460264 LSM4Q9Y4Z0 139 aaKnown RBP14.58□□□□□ -0.08
COL5A1-203ENST00000460264 AIREO43918 545 aa14.57□□□□□ -0.08
COL5A1-203ENST00000460264 SAA1P0DJI8 122 aaPredicted RBP14.57□□□□□ -0.08
COL5A1-203ENST00000460264 ARPC4P59998 168 aa14.57□□□□□ -0.08
COL5A1-203ENST00000460264 EIF4EBP1Q13541 118 aaPredicted RBP14.57□□□□□ -0.08
COL5A1-203ENST00000460264 TNXAQ16473 311 aa14.57□□□□□ -0.08
COL5A1-203ENST00000460264 OR2B11Q5JQS5 317 aa14.57□□□□□ -0.08
COL5A1-203ENST00000460264 HOGA1Q86XE5 327 aa14.57□□□□□ -0.08
COL5A1-203ENST00000460264 CROCCP3Q8IVE0 287 aa14.57□□□□□ -0.08
COL5A1-203ENST00000460264 HSD17B10Q99714 261 aaKnown RBP14.57□□□□□ -0.08
COL5A1-203ENST00000460264 DIABLOQ9NR28 239 aa14.57□□□□□ -0.08
COL5A1-203ENST00000460264 MRPS7Q9Y2R9 242 aaKnown RBP14.57□□□□□ -0.08
COL5A1-203ENST00000460264 A0A0G2JLM5 398 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 C13orf42A0A1B0GVH6 325 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 MSGN1A6NI15 193 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 SAP30O75446 220 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 BRI3O95415 125 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 APELAP0DMC3 54 aa14.56□□□□□ -0.08
COL5A1-203ENST00000460264 PTHLHP12272 177 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms