RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 PYHIN1Q6K0P9 492 aa12.71□□□□□ -0.37
NCKIPSD-208ENST00000454134 OR5T1Q8NG75 326 aa12.71□□□□□ -0.37
NCKIPSD-208ENST00000454134 LINC00473A8K010 186 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 LINC01619G3V211 115 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 SSX5O60225 188 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 TRGV3P03979 118 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 NFYAP23511 347 aaPredicted RBP12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 CD40LGP29965 261 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 DUTP33316 252 aaKnown RBP12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 CBX3Q13185 183 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 TMEM177Q53S58 311 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 VAX1Q5SQQ9 334 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 OR5H6Q8NGV6 325 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 DDB2Q92466 427 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 CENPOQ9BU64 300 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 ZNF355PQ9NSJ1 428 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 RHBDL2Q9NX52 303 aa12.7□□□□□ -0.38
NCKIPSD-208ENST00000454134 LY86O95711 162 aa12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 CRYZL1O95825 349 aa12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 CD36P16671 472 aa12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 GNG2P59768 71 aa12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 TAGLNQ01995 201 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 DCTN2Q13561 401 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 MRGPRG-AS1Q2M3A8 158 aa12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 IDNKQ5T6J7 187 aa12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 IDO2Q6ZQW0 420 aa12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 RHOVQ96L33 236 aa12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 ZNF256Q9Y2P7 627 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 LSM4Q9Y4Z0 139 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-208ENST00000454134 SAP30O75446 220 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 HSPB1P04792 205 aaKnown RBP12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 APELAP0DMC3 54 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 RRASP10301 218 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 PITPNAQ00169 270 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 DEFA5Q01523 94 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 POC5Q8NA72 575 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 SLC25A38Q96DW6 304 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 ADTRPQ96IZ2 230 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 DCSTAMPQ9H295 470 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 SLA2Q9H6Q3 261 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 OR2W1Q9Y3N9 320 aa12.68□□□□□ -0.38
NCKIPSD-208ENST00000454134 IGKV1D-13A0A0B4J2D9 117 aa12.67□□□□□ -0.38
NCKIPSD-208ENST00000454134 SCGNO76038 276 aa12.67□□□□□ -0.38
NCKIPSD-208ENST00000454134 CTXN2P0C2S0 81 aa12.67□□□□□ -0.38
NCKIPSD-208ENST00000454134 IGKV1-13P0DP09 117 aa12.67□□□□□ -0.38
NCKIPSD-208ENST00000454134 INSL3P51460 131 aa12.67□□□□□ -0.38
NCKIPSD-208ENST00000454134 KCTD21Q4G0X4 260 aa12.67□□□□□ -0.38
NCKIPSD-208ENST00000454134 OR2B11Q5JQS5 317 aa12.67□□□□□ -0.38
NCKIPSD-208ENST00000454134 CNIH2Q6PI25 160 aa12.67□□□□□ -0.38
NCKIPSD-208ENST00000454134 ZNF645Q8N7E2 425 aa12.67□□□□□ -0.38
NCKIPSD-208ENST00000454134 TRAV18A0A075B6X5 111 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 MSGN1A6NI15 193 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 FCGR3BO75015 233 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 TUSC2O75896 110 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 HLA-DQB1P01920 261 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 PTHLHP12272 177 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 UBE2KP61086 200 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 RPL30P62888 115 aaKnown RBP12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 TNXAQ16473 311 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 PRSS8Q16651 343 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 ZNF429Q86V71 674 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 TEX45Q8NA69 505 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 PHB2Q99623 299 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 DCUN1D5Q9BTE7 237 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 ANXA10Q9UJ72 324 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 ETV7Q9Y603 341 aa12.66□□□□□ -0.38
NCKIPSD-208ENST00000454134 C13orf42A0A1B0GVH6 325 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 ANKRD34BA5PLL1 514 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 IGLV2-14P01704 120 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 FCER2P06734 321 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 TGFBR1P36897 503 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 ACSM6Q6P461 480 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 KCTD9Q7L273 389 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 GVQW1Q8N7I0 195 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 OSR1Q8TAX0 266 aaPredicted RBP12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 ACOT12Q8WYK0 555 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 ASCL2Q99929 193 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 COA4Q9NYJ1 87 aa12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 RBMX2Q9Y388 322 aaKnown RBP12.65□□□□□ -0.38
NCKIPSD-208ENST00000454134 DNAH9Q9NYC9 4486 aa12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 H3BUA1 57 aa12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 SAA1P0DJI8 122 aaPredicted RBP12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 SPNP16150 400 aa12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 SCAND1P57086 179 aa12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 HAPLN4Q86UW8 402 aa12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 GPHA2Q96T91 129 aa12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 TINAGL1Q9GZM7 467 aaPredicted RBP12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 ZNF430Q9H8G1 570 aaPredicted RBP12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
NCKIPSD-208ENST00000454134 A0A0G2JLM5 398 aa12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 ARPC4P59998 168 aa12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 C10orf55Q5SWW7 151 aa12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 VKORC1L1Q8N0U8 176 aa12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 BEST4Q8NFU0 473 aa12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 TCTEX1D2Q8WW35 142 aa12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 SRSF12Q8WXF0 261 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 TMEM68Q96MH6 324 aa12.63□□□□□ -0.39
NCKIPSD-208ENST00000454134 RANGRFQ9HD47 186 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms