RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 LRRC3CA6NJW4 275 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 ORM2P19652 201 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 AGAP20933 346 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 SAP30LQ9HAJ7 183 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 TMEM140Q9NV12 185 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 CLDN18P56856 261 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 PAFAH1B2P68402 229 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 ICAM4Q14773 271 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 BLNKQ8WV28 456 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 NDFIP1Q9BT67 221 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 CALYQ9NYX4 217 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 FOXJ2Q9P0K8 574 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 SMPD2O60906 423 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 HOXA5P20719 270 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 USF1P22415 310 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-206ENST00000445265 HSPE1P61604 102 aaKnown RBP14.11□□□□□ -0.15
TCOF1-206ENST00000445265 FOXL2NBQ6ZUU3 175 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 FGFBP3Q8TAT2 258 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 HIF1ANQ9NWT6 349 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 TRGV8A0A0C4DH27 118 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 TMEM42Q69YG0 159 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 TGIF2LYQ8IUE0 185 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 TGIF2LXQ8IUE1 241 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 DEPPQ9NTK1 212 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 RBP4P02753 201 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 MT-ND6P03923 174 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 G0S2P27469 103 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 PQLC2Q6ZP29 291 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 OR4F17Q8NGA8 305 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 IGKV3D-15A0A087WSY6 115 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 M0QZK8 103 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 GGCTO75223 188 aaKnown RBP14.11□□□□□ -0.15
TCOF1-206ENST00000445265 GGNQ86UU5 652 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 GSN-AS1Q9NRJ2 163 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 TCF19Q9Y242 345 aa14.11□□□□□ -0.15
TCOF1-206ENST00000445265 CEP250Q9BV73 2442 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 NTN3O00634 580 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-206ENST00000445265 CAMPP49913 170 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 RPL31P62899 125 aaKnown RBP14.1□□□□□ -0.15
TCOF1-206ENST00000445265 OPN3Q9H1Y3 402 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-206ENST00000445265 SDF2L1Q9HCN8 221 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 ANAPC10Q9UM13 185 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 SSTR5P35346 364 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 C10orf113Q5VZT2 155 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 MRPL54Q6P161 138 aaKnown RBP14.1□□□□□ -0.15
TCOF1-206ENST00000445265 OR4X1Q8NH49 305 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 DDTP30046 118 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 LRP11Q86VZ4 500 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 Q8WTZ3 238 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 ITLN1Q8WWA0 313 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 NPCDR1Q9BY65 106 aa14.1□□□□□ -0.15
TCOF1-206ENST00000445265 UBE2CO00762 179 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 AAMDCQ9H7C9 122 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 A0A1B0GW64 132 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 C1orf147Q96MC9 270 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-206ENST00000445265 SERTM2A0A1B0GWG4 89 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 NKX2-8O15522 239 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 TNXAQ16473 311 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 ZNF385CQ66K41 422 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-206ENST00000445265 ACP7Q6ZNF0 438 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 TMEM183AQ8IXX5 376 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 OR1B1Q8NGR6 318 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 OR2T6Q8NHC8 308 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 DOCK8Q8NF50 2099 aa14.09□□□□□ -0.15
TCOF1-206ENST00000445265 TRAV24A0A0B4J272 114 aa14.08□□□□□ -0.15
TCOF1-206ENST00000445265 WNT9BO14905 357 aa14.08□□□□□ -0.15
TCOF1-206ENST00000445265 WISP1O95388 367 aa14.08□□□□□ -0.15
TCOF1-206ENST00000445265 ACAA1P09110 424 aaPredicted RBP14.08□□□□□ -0.15
TCOF1-206ENST00000445265 ARL14EPLP0DKL9 152 aa14.08□□□□□ -0.15
TCOF1-206ENST00000445265 SPSB4Q96A44 273 aa14.08□□□□□ -0.15
TCOF1-206ENST00000445265 SFXN3Q9BWM7 321 aa14.08□□□□□ -0.15
TCOF1-206ENST00000445265 AMMECR1Q9Y4X0 333 aaPredicted RBP14.08□□□□□ -0.15
TCOF1-206ENST00000445265 DNAJC13O75165 2243 aa14.08□□□□□ -0.15
TCOF1-206ENST00000445265 NUP210Q8TEM1 1887 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-206ENST00000445265 CCL20P78556 96 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 ASCL5Q7RTU5 278 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 RND1Q92730 232 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 PERPQ96FX8 193 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 PLPPR1Q8TBJ4 325 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 TBX15Q96SF7 602 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 GVINP1Q7Z2Y8 2422 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 SPAARA0A1B0GVQ0 90 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 ADCYAP1P18509 176 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 BRS3P32247 399 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 CSRP2Q16527 193 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 FA2HQ7L5A8 372 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 CCL13Q99616 98 aa14.08□□□□□ -0.16
TCOF1-206ENST00000445265 SLC25A10Q9UBX3 287 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-206ENST00000445265 COLQQ9Y215 455 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-206ENST00000445265 NAPSAO96009 420 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 ZNF324BQ6AW86 544 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-206ENST00000445265 WDR31Q8NA23 367 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 HIST1H1EP10412 219 aaKnown RBP14.07□□□□□ -0.16
TCOF1-206ENST00000445265 LCN2P80188 198 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 PSG7Q13046 419 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 QTRT1Q9BXR0 403 aaKnown RBP14.07□□□□□ -0.16
TCOF1-206ENST00000445265 C17orf98A8MV24 154 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 FAM216AQ8WUB2 273 aa14.07□□□□□ -0.16
TCOF1-206ENST00000445265 BARX1Q9HBU1 254 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-206ENST00000445265 C16orf97H3BN30 126 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms