RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 KLK2P20151 261 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 ZNF25P17030 456 aaPredicted RBP11.25□□□□□ -0.61
SPG11-202ENST00000427534 RNASE4P34096 147 aaKnown RBP11.25□□□□□ -0.61
SPG11-202ENST00000427534 MFAP2P55001 183 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 PQLC2Q6ZP29 291 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 ADIPOR1Q96A54 375 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 DLL3Q9NYJ7 618 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 ANOS1P23352 680 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 MEIG1Q5JSS6 88 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 FAM27BQ5VT28 67 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 ODAMA1E959 279 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 CD1AP06126 327 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 ZNF343Q6P1L6 599 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 ATP6V0CP27449 155 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 CKS2P33552 79 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 FGF12P61328 243 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 WDR25Q64LD2 544 aaPredicted RBP11.25□□□□□ -0.61
SPG11-202ENST00000427534 DUX3Q96PT4 197 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 TBL2Q9Y4P3 447 aaKnown RBP11.25□□□□□ -0.61
SPG11-202ENST00000427534 LHFPL6Q9Y693 200 aa11.25□□□□□ -0.61
SPG11-202ENST00000427534 A0A0U1RQV5 110 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 LIPFP07098 398 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 CLEC7AQ9BXN2 247 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 FOXA2Q9Y261 457 aaPredicted RBP11.24□□□□□ -0.61
SPG11-202ENST00000427534 A0A1W2PS18 150 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 AP4M1O00189 453 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 SYNGR3O43761 229 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 KLF7O75840 302 aaPredicted RBP11.24□□□□□ -0.61
SPG11-202ENST00000427534 GNLYP22749 145 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 APOBEC3AP31941 199 aaPredicted RBP11.24□□□□□ -0.61
SPG11-202ENST00000427534 MFAP4P55083 255 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 IQCJQ1A5X6 159 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 TMEM183BQ1AE95 376 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 RAB37Q96AX2 223 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 MPDU1O75352 247 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 IL4P05112 153 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 PRSS2P07478 247 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
SPG11-202ENST00000427534 GPR183P32249 361 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 CSRP3P50461 194 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 RELQ04864 619 aaPredicted RBP11.24□□□□□ -0.61
SPG11-202ENST00000427534 SCMH1Q96GD3 660 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 OPN4Q9UHM6 478 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 NPFFO15130 113 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 EGR1P18146 543 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 COLCA1Q6ZS62 124 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 WNT5BQ9H1J7 359 aa11.24□□□□□ -0.61
SPG11-202ENST00000427534 GPR82Q96P67 336 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 LY75O60449 1722 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 ELOBQ15370 118 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 C9orf62Q8N4C0 152 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 SRSF12Q8WXF0 261 aaKnown RBP11.23□□□□□ -0.61
SPG11-202ENST00000427534 SH3BGRL3Q9H299 93 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 TOMM7Q9P0U1 55 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 VAX2Q9UIW0 290 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 LOC107984156A0A0G2JMH3 177 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 A0A1W2PPC1 479 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 CACNG7P62955 275 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 ARL17AQ8IVW1 177 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 MRPL30Q8TCC3 161 aaKnown RBP11.23□□□□□ -0.61
SPG11-202ENST00000427534 EEF1AKMT3Q96AZ1 226 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 M0R381 172 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 KIAA1644Q3SXP7 199 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 SFXN3Q9BWM7 321 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 C7orf71A4D174 169 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 H3BQ15 152 aa11.23□□□□□ -0.61
SPG11-202ENST00000427534 PGLYRP1O75594 196 aaPredicted RBP11.23□□□□□ -0.61
SPG11-202ENST00000427534 NFAM1Q8NET5 270 aaPredicted RBP11.23□□□□□ -0.61
SPG11-202ENST00000427534 ARL14EPLP0DKL9 152 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 DNLZQ5SXM8 178 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 HOGA1Q86XE5 327 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 C1orf162Q8NEQ5 155 aaPredicted RBP11.22□□□□□ -0.61
SPG11-202ENST00000427534 LINC01587Q99440 93 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 SRSF7Q16629 238 aaKnown RBP eCLIP11.22□□□□□ -0.61
SPG11-202ENST00000427534 ATOH7Q8N100 152 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 KCNE5Q9UJ90 142 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 MAP1BP46821 2468 aaKnown RBP11.22□□□□□ -0.61
SPG11-202ENST00000427534 DSPPQ9NZW4 1301 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 RARRES2Q99969 163 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 TMEM106BQ9NUM4 274 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 TNS1Q9HBL0 1735 aaKnown RBP11.22□□□□□ -0.61
SPG11-202ENST00000427534 KBTBD11O94819 623 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 PRR31Q5SQ13 230 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 GOLT1AQ6ZVE7 132 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 FGFRL1Q8N441 504 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 A0A1B0GV72 72 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 KLF4O43474 513 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 NPPCP23582 126 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 ZXDCQ2QGD7 858 aaPredicted RBP11.22□□□□□ -0.61
SPG11-202ENST00000427534 C9orf106Q8NAJ2 232 aa11.22□□□□□ -0.61
SPG11-202ENST00000427534 J3QR89 54 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 CECR9P0C854 216 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 SPACA3Q8IXA5 215 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 NPIPB3Q92617 1050 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 ZNF837Q96EG3 531 aaPredicted RBP11.21□□□□□ -0.61
SPG11-202ENST00000427534 MTCL1Q9Y4B5 1905 aaKnown RBP11.21□□□□□ -0.61
SPG11-202ENST00000427534 WDR73Q6P4I2 378 aa11.21□□□□□ -0.61
SPG11-202ENST00000427534 LINC00596Q86U02 117 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms