RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 RPL36A-HNRNPH2H7BZ11 118 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 AGPAT2O15120 278 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 GATCO43716 136 aaKnown RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 EIF3GO75821 320 aaKnown RBP eCLIP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 CBR3O75828 277 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 OR7C1O76099 320 aaPredicted RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 TSHBP01222 138 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 IFNA5P01569 189 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 P04436 131 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 PRSS1P07477 247 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 SP9P0CG40 484 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 COX5BP10606 129 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 CEACAM1P13688 526 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 FUT3P21217 361 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 VDAC1P21796 283 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 MAS1LP35410 378 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 DUSP3P51452 185 aaPredicted RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 ARHGDIBP52566 201 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 TAS2R30P59541 319 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 RPL23AP62750 156 aaKnown RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 HBG1P69891 147 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 HBG2P69892 147 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 FABP9Q0Z7S8 132 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 TAF9Q16594 264 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 ACSF3Q4G176 576 aaPredicted RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 AKIRIN2Q53H80 203 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 KHDC3LQ587J8 217 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 PRAMEF20Q5VT98 475 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 LYSMD4Q5XG99 296 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 SLC35E3Q7Z769 313 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 RPS19BP1Q86WX3 136 aaKnown RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 MMD2Q8IY49 270 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 MKXQ8IYA7 352 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 ZFP82Q8N141 532 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM156Q8N614 296 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 SLC35G3Q8N808 338 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 HSD17B11Q8NBQ5 300 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 OR10AD1Q8NGE0 317 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 OR5D13Q8NGL4 314 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 OR2G3Q8NGZ4 309 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 RNASE11Q8TAA1 199 aaKnown RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 GTF3AQ92664 365 aaKnown RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM45BQ96B21 275 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 BTF3L4Q96K17 158 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM56Q96MV1 263 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 ALKBH3Q96Q83 286 aaPredicted RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 RAB40CQ96S21 281 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 ATP5SQ99766 215 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 B4GALT7Q9UBV7 327 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 ZMAT5Q9UDW3 170 aaKnown RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 BOKQ9UMX3 212 aaPredicted RBP4.12□□□□□ -1.75
LINC00458-202ENST00000427299 ST3GAL6Q9Y274 331 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 SLCO1B1Q9Y6L6 691 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM56-RWDD3S4R434 201 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 UNC80Q8N2C7 3258 aa4.12□□□□□ -1.75
LINC00458-202ENST00000427299 CHD3Q12873 2000 aaKnown RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 IGHV5-10-1A0A0J9YXX1 117 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 A0A1B0GWJ7 208 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 OR5H15A6NDH6 313 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 OR5B21A6NL26 309 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 SHISA7A6NL88 538 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 PMS2P5A8MQ11 134 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 TNFSF11O14788 317 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 GEMIN2O14893 280 aaKnown RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 SSSCA1O60232 199 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 SOX15O60248 233 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 IGHV2-5P01817 119 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 OPN1MWP04001 364 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 FBP1P09467 338 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 FRMD6-AS1P0C7T7 363 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 OPN1MW2P0DN77 364 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 OPN1MW3P0DN78 364 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 IGHV4-38-2P0DP08 117 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 COX6A1P12074 109 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF32P17041 273 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 ACKR3P25106 362 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 NFYBP25208 207 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 UCP1P25874 307 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 ATP6V0CP27449 155 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 CD200P41217 278 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 UBE2KP61086 200 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 FGF12P61328 243 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 RPS23P62266 143 aaKnown RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 HLA-DRB3P79483 266 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 SNAI3Q3KNW1 292 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 SPIN3Q5JUX0 258 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF506Q5JVG8 444 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 FIP1L1Q6UN15 594 aaKnown RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 C16orf47Q6ZP98 133 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 AAED1Q7RTV5 226 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 MRPL21Q7Z2W9 205 aaKnown RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 RTN4RL2Q86UN3 420 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 WDFY1Q8IWB7 410 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 Q8IYB0 196 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 H1FOOQ8IZA3 346 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 BHLHE23Q8NDY6 225 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 OR2Y1Q8NGV0 311 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 OR2V1Q8NHB1 315 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 HPSE2Q8WWQ2 592 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 PINX1Q96BK5 328 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms