RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ST6GALNAC6Q969X2 333 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 TMEM186Q96B77 213 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.41□□□□□ -0.42
ACTB-204ENST00000425660 FBXL17Q9UF56 701 aa12.41□□□□□ -0.42
ACTB-204ENST00000425660 C22orf46C9J442 243 aa12.4□□□□□ -0.42
ACTB-204ENST00000425660 SYNGR2O43760 224 aa12.4□□□□□ -0.42
ACTB-204ENST00000425660 LIPFP07098 398 aa12.4□□□□□ -0.42
ACTB-204ENST00000425660 NQO2P16083 231 aa12.4□□□□□ -0.42
ACTB-204ENST00000425660 GNB2P62879 340 aa12.4□□□□□ -0.42
ACTB-204ENST00000425660 ABHD12Q8N2K0 398 aa12.4□□□□□ -0.42
ACTB-204ENST00000425660 TMEM252Q8N6L7 170 aa12.4□□□□□ -0.42
ACTB-204ENST00000425660 SSBP3Q9BWW4 388 aaPredicted RBP12.4□□□□□ -0.42
ACTB-204ENST00000425660 ZC4H2Q9NQZ6 224 aa12.4□□□□□ -0.42
ACTB-204ENST00000425660 TENM4Q6N022 2769 aa12.4□□□□□ -0.42
ACTB-204ENST00000425660 YLPM1P49750 1951 aaKnown RBP12.4□□□□□ -0.42
ACTB-204ENST00000425660 NXPH3O95157 252 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 CAV2P51636 162 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 TAS2R30P59541 319 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 VAMP2P63027 116 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 EWSR1Q01844 656 aaKnown RBP eCLIP12.39□□□□□ -0.436e-17■■■□□ 16.2
ACTB-204ENST00000425660 TNFRSF9Q07011 255 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 BAXQ07812 192 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 POU2AF1Q16633 256 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 DHRS7BQ6IAN0 325 aaPredicted RBP12.39□□□□□ -0.43
ACTB-204ENST00000425660 OR10X1Q8NGY0 326 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 SLC25A31Q9H0C2 315 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 hCG_1809904A0A1W2PP81 198 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 A0A1W2PPE2 198 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 A0A1W2PR64 198 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 A0A1W2PRV1 198 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 IGSF23A1L1A6 192 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 JTBO76095 146 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 UBE2KP61086 200 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 RAB14P61106 215 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
ACTB-204ENST00000425660 TAGLNQ01995 201 aaKnown RBP12.39□□□□□ -0.43
ACTB-204ENST00000425660 UBAC2Q8NBM4 344 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 OR5AN1Q8NGI8 311 aa12.39□□□□□ -0.43
ACTB-204ENST00000425660 ASH1LQ9NR48 2969 aaKnown RBP12.39□□□□□ -0.43
ACTB-204ENST00000425660 IGHV2-26A0A0B4J1V2 119 aa12.38□□□□□ -0.43
ACTB-204ENST00000425660 FAM24AA6NFZ4 105 aa12.38□□□□□ -0.43
ACTB-204ENST00000425660 NMBP08949 121 aa12.38□□□□□ -0.43
ACTB-204ENST00000425660 NHLH2Q02577 135 aa12.38□□□□□ -0.43
ACTB-204ENST00000425660 RPL7L1Q6DKI1 246 aaKnown RBP12.38□□□□□ -0.43
ACTB-204ENST00000425660 BEND2Q8NDZ0 799 aa12.38□□□□□ -0.43
ACTB-204ENST00000425660 SMIM8Q96KF7 97 aa12.38□□□□□ -0.43
ACTB-204ENST00000425660 DOCK11Q5JSL3 2073 aa12.38□□□□□ -0.43
ACTB-204ENST00000425660 LINC00862A6NCI5 91 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 TXNL1O43396 289 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 CRYZL1O95825 349 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 ERVK-16P61578 105 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 RPL23AP62750 156 aaKnown RBP12.37□□□□□ -0.43
ACTB-204ENST00000425660 RTL8BQ17RB0 113 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 PDLIM3Q53GG5 364 aaPredicted RBP12.37□□□□□ -0.43
ACTB-204ENST00000425660 ZNF525Q8N782 197 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 BSCL2Q96G97 398 aaPredicted RBP12.37□□□□□ -0.43
ACTB-204ENST00000425660 CCL19Q99731 98 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 SLC25A32Q9H2D1 315 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 HELZ2Q9BYK8 2649 aaKnown RBP12.37□□□□□ -0.43
ACTB-204ENST00000425660 LRRK2Q5S007 2527 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 LOC105371242A0A075B767 164 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 J3QKU1 62 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 M0R1W7 72 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 MED6O75586 246 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 IGHV2-5P01817 119 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 IGKV1-16P04430 117 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 RRASP10301 218 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 Q8N7P7 452 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 RHOVQ96L33 236 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 PCGF1Q9BSM1 259 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 CLEC7AQ9BXN2 247 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 MRPL20Q9BYC9 149 aaKnown RBP12.37□□□□□ -0.43
ACTB-204ENST00000425660 ARV1Q9H2C2 271 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 NARFLQ9H6Q4 476 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 SLC35D1Q9NTN3 355 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 TMEM140Q9NV12 185 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 CACFD1Q9UGQ2 172 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 AUP1Q9Y679 476 aa12.37□□□□□ -0.43
ACTB-204ENST00000425660 H0YJW9 148 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 HRASP01112 189 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 IL6RP08887 468 aaPredicted RBP12.36□□□□□ -0.43
ACTB-204ENST00000425660 HLA-DRB5Q30154 266 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 CLEC9AQ6UXN8 241 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 C1orf122Q6ZSJ8 110 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 VKORC1L1Q8N0U8 176 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 OR52E5Q8NH55 327 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 NABP2Q9BQ15 211 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 BPESC1Q9GZL8 116 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 WFDC1Q9HC57 220 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 TACC2O95359 2948 aa12.36□□□□□ -0.43
ACTB-204ENST00000425660 A8MXK9 166 aa12.35□□□□□ -0.43
ACTB-204ENST00000425660 IL3RAP26951 378 aa12.35□□□□□ -0.43
ACTB-204ENST00000425660 PRRX1P54821 245 aa12.35□□□□□ -0.43
ACTB-204ENST00000425660 RELBQ01201 579 aa12.35□□□□□ -0.43
ACTB-204ENST00000425660 STPG2Q8N412 459 aa12.35□□□□□ -0.43
ACTB-204ENST00000425660 OSR1Q8TAX0 266 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms