RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 LINC01619G3V211 115 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 SHOXO15266 292 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 SLC25A17O43808 307 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 SOX15O60248 233 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 CREBL2O60519 120 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 CRYGBP07316 175 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 LGALS1P09382 135 aaKnown RBP11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 NHLRC4P0CG21 123 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 SDC2P34741 201 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 NDPQ00604 133 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 ZNF260Q3ZCT1 412 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 RHOVQ96L33 236 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 CLCC1Q96S66 551 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 FBXO7Q9Y3I1 522 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 OR2W1Q9Y3N9 320 aa11.27□□□□□ -0.61
NIF3L1-205ENST00000409588 A0A0B4J203 849 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 OVOL1O14753 267 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 HLA-DQB1P01920 261 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 CD36P16671 472 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 DUTP33316 252 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 GNG2P59768 71 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 UBE2KP61086 200 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 CD69Q07108 199 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 VMA21Q3ZAQ7 101 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 VAX1Q5SQQ9 334 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 ZNF645Q8N7E2 425 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 HARBI1Q96MB7 349 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 OR51E2Q9H255 320 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 DIABLOQ9NR28 239 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 TPSG1Q9NRR2 321 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 PRELID3BQ9Y3B1 194 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 A3GALT2U3KPV4 340 aa11.26□□□□□ -0.61
NIF3L1-205ENST00000409588 AADACP22760 399 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 LINC00205P59089 165 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 GNB1P62873 340 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 BVESQ8NE79 360 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 MAFIPQ8WZ33 124 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 DDB2Q92466 427 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 USMG5Q96IX5 58 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 RANGRFQ9HD47 186 aaPredicted RBP11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 VCX3AQ9NNX9 186 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 RHBDL2Q9NX52 303 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 ANXA10Q9UJ72 324 aa11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 ZNF256Q9Y2P7 627 aaPredicted RBP11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 LSM4Q9Y4Z0 139 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-205ENST00000409588 C13orf42A0A1B0GVH6 325 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 TRGV3P03979 118 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 ZP3P21754 424 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 ECI1P42126 302 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 TPPP2P59282 170 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 MSMO1Q15800 293 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 POC5Q8NA72 575 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 DCUN1D4Q92564 292 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 OR5B12Q96R08 314 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 HSD17B10Q99714 261 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 AIFM2Q9BRQ8 373 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 ELOVL1Q9BW60 279 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 ZNF355PQ9NSJ1 428 aa11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 MRPS7Q9Y2R9 242 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-205ENST00000409588 IGKV1D-8A0A087WSZ0 117 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 LOC100506127A0A0U1RQW1 187 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 TMEM235A6NFC5 223 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 SRRM4A7MD48 611 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 CBX5P45973 191 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 FAM209BQ5JX69 171 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 IDNKQ5T6J7 187 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 ASPHD1Q5U4P2 390 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 ACSM6Q6P461 480 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 OVCH2Q7RTZ1 564 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 ZBTB34Q8NCN2 500 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 GRPEL2Q8TAA5 225 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 VSTM2AQ8TAG5 236 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 LGALS14Q8TCE9 139 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 MS4A10Q96PG2 267 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 SPATA2Q9UM82 520 aa11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 RBMX2Q9Y388 322 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-205ENST00000409588 A0A087WXM4 84 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 SMIM30A4D0T7 59 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 ACTL6BO94805 426 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 CRYZL1O95825 349 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 MXD1Q05195 221 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 NEDD8Q15843 81 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 PRSS8Q16651 343 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 TATDN3Q17R31 274 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 ZNF66Q6ZN08 573 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 MMD2Q8IY49 270 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 OR6Q1Q8NGQ2 317 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 S100A16Q96FQ6 103 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 OR4C12Q96R67 309 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 SPIN2AQ99865 258 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 SPIN2BQ9BPZ2 258 aa11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 TINAGL1Q9GZM7 467 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 ELF5Q9UKW6 265 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-205ENST00000409588 TRAV18A0A075B6X5 111 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 MSGN1A6NI15 193 aa11.21□□□□□ -0.61
NIF3L1-205ENST00000409588 LINC00473A8K010 186 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 260.9 ms