RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SFXN3Q9BWM7 321 aa13.97□□□□□ -0.17
NUP50-203ENST00000407019 NPCDR1Q9BY65 106 aa13.97□□□□□ -0.17
NUP50-203ENST00000407019 SLC25A22Q9H936 323 aa13.97□□□□□ -0.17
NUP50-203ENST00000407019 OR6C3Q9NZP0 311 aa13.97□□□□□ -0.17
NUP50-203ENST00000407019 C15orf62A8K5M9 175 aa13.96□□□□□ -0.17
NUP50-203ENST00000407019 LY86O95711 162 aa13.96□□□□□ -0.17
NUP50-203ENST00000407019 S100A8P05109 93 aa13.96□□□□□ -0.17
NUP50-203ENST00000407019 AARDQ4LEZ3 155 aa13.96□□□□□ -0.17
NUP50-203ENST00000407019 ZNF709Q8N972 641 aa13.96□□□□□ -0.17
NUP50-203ENST00000407019 OR10G9Q8NGN4 311 aa13.96□□□□□ -0.17
NUP50-203ENST00000407019 OR10G7Q8NGN6 311 aa13.96□□□□□ -0.17
NUP50-203ENST00000407019 IFI27L2Q9H2X8 130 aa13.96□□□□□ -0.17
NUP50-203ENST00000407019 CALYQ9NYX4 217 aa13.96□□□□□ -0.17
NUP50-203ENST00000407019 RBFOX2O43251 390 aaKnown RBP eCLIP13.95□□□□□ -0.18
NUP50-203ENST00000407019 ERVK-16P61578 105 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 RPL39P5Q59GN2 51 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 RBMXL3Q8N7X1 1067 aaKnown RBP13.95□□□□□ -0.18
NUP50-203ENST00000407019 FAM234AQ9H0X4 552 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 URGCP-MRPS24S4R325 110 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 C17orf112F2Z3M2 114 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 AP4M1O00189 453 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 CXCL1P09341 107 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 GATA4P43694 442 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 ERVFRD-1P60508 538 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 OR4A16Q8NH70 328 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 ACTR3CQ9C0K3 210 aaPredicted RBP13.95□□□□□ -0.18
NUP50-203ENST00000407019 NCOR1P1Q9H4R4 102 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 SDF2L1Q9HCN8 221 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 RAB9BQ9NP90 201 aa13.95□□□□□ -0.18
NUP50-203ENST00000407019 CYB5R3P00387 301 aaPredicted RBP13.94□□□□□ -0.18
NUP50-203ENST00000407019 NQO2P16083 231 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 MDKP21741 143 aaPredicted RBP13.94□□□□□ -0.18
NUP50-203ENST00000407019 KIR2DS2P43631 304 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 ZNF134P52741 427 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 SELENOVP59797 346 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 SPCS3P61009 180 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 MEF2BQ02080 365 aaPredicted RBP13.94□□□□□ -0.18
NUP50-203ENST00000407019 SSX9Q7RTT3 188 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 Q8TCH9 128 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 S1PR3Q99500 378 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 USF3Q68DE3 2245 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 HMGB3O15347 200 aaKnown RBP13.94□□□□□ -0.18
NUP50-203ENST00000407019 IGHV3-7P01780 117 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 CEACAM8P31997 349 aaPredicted RBP13.94□□□□□ -0.18
NUP50-203ENST00000407019 PSMB3P49720 205 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 RAB7AP51149 207 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 CD81P60033 236 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 RPP30P78346 268 aaKnown RBP13.94□□□□□ -0.18
NUP50-203ENST00000407019 ZNF674Q2M3X9 581 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 FAM201AQ5SY85 155 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 FAM222BQ8WU58 562 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 RNF7Q9UBF6 113 aa13.94□□□□□ -0.18
NUP50-203ENST00000407019 HEATR1Q9H583 2144 aaKnown RBP13.93□□□□□ -0.18
NUP50-203ENST00000407019 TGIF2-C20orf24A0A0A6YYL0 155 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 K7EM74 188 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 ITGB1BP1O14713 200 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 SMIM6P0DI80 62 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 CGB3P0DN86 165 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 CGB7P0DN87 165 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 SELLP14151 372 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 KIAA0141Q14154 515 aaPredicted RBP13.93□□□□□ -0.18
NUP50-203ENST00000407019 C17orf58Q2M2W7 97 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 WDR25Q64LD2 544 aaPredicted RBP13.93□□□□□ -0.18
NUP50-203ENST00000407019 FAM57AQ8TBR7 257 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 TMEM242Q9NWH2 141 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 GAB2Q9UQC2 676 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 ZNF318Q5VUA4 2279 aa13.93□□□□□ -0.18
NUP50-203ENST00000407019 SLC31A2O15432 143 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 PLA2G5P39877 138 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 TNFAIP6P98066 277 aaPredicted RBP13.92□□□□□ -0.18
NUP50-203ENST00000407019 OR52E5Q8NH55 327 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 TCEAL7Q9BRU2 100 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 TMPRSS5Q9H3S3 457 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 WDR83OSQ9Y284 106 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 EP300Q09472 2414 aaPredicted RBP13.92□□□□□ -0.18
NUP50-203ENST00000407019 CLDN34H7C241 214 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 KLK10O43240 276 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 IGHV1-46P01743 117 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 S100A9P06702 114 aaKnown RBP13.92□□□□□ -0.18
NUP50-203ENST00000407019 FAM27E3Q08E93 113 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 ACOT6Q3I5F7 207 aaPredicted RBP13.92□□□□□ -0.18
NUP50-203ENST00000407019 KRTCAP3Q53RY4 240 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 VKORC1L1Q8N0U8 176 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 RAB24Q969Q5 203 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 SDSLQ96GA7 329 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 GCM1Q9NP62 436 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 GFOD1Q9NXC2 390 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 IL19Q9UHD0 177 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 NAT8Q9UHE5 227 aa13.92□□□□□ -0.18
NUP50-203ENST00000407019 CACNA1DQ01668 2161 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 PRRC2CQ9Y520 2896 aaKnown RBP13.91□□□□□ -0.18
NUP50-203ENST00000407019 DIDO1Q9BTC0 2240 aaKnown RBP13.91□□□□□ -0.18
NUP50-203ENST00000407019 KBTBD11-OT1A0A1B0GTJ5 212 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 CYB5BO43169 146 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 IFNA10P01566 189 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 CD1BP29016 333 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 RND2P52198 227 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 TLE1Q04724 770 aa13.91□□□□□ -0.18
NUP50-203ENST00000407019 TCF15Q12870 199 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms