RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 OPRK1P41145 380 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 GZMMP51124 257 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 NCALDP61601 193 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CAV1Q03135 178 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SMAGPQ0VAQ4 97 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 LRRC26Q2I0M4 334 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 LINC00303Q3SY05 128 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PYY3Q5JQD4 70 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAM74A1Q5RGS3 127 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZNF684Q5T5D7 378 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 Q6P435 159 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZFP2Q6ZN57 461 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 DEFB128Q7Z7B8 93 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SLC30A7Q8NEW0 376 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4E2Q8NGC2 313 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR13C6PQ8NH95 151 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR5K1Q8NHB7 308 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SLC37A2Q8TED4 501 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SKA2Q8WVK7 121 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CYGBQ8WWM9 190 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 BTF3L4Q96K17 158 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CNBD2Q96M20 576 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CCDC115Q96NT0 180 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 GPR82Q96P67 336 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 IP6K3Q96PC2 410 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 RBP7Q96R05 134 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR2M4Q96R27 311 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 APOL4Q9BPW4 351 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 LINC00470Q9BZP3 86 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 MAP1LC3BQ9GZQ8 125 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PRO1933Q9H354 126 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAM206AQ9NX38 181 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 MED29Q9NX70 200 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SCP2D1Q9UJQ7 156 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ERG28Q9UKR5 140 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PKIGQ9Y2B9 76 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CABIN1Q9Y6J0 2220 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 VWA8A3KMH1 1905 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 NALCNQ8IZF0 1738 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ADAMTS12P58397 1594 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 GRIN2AQ12879 1464 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 GRIN2BQ13224 1484 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 DICER1Q9UPY3 1922 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 LOC102724200A0A096LPH7 203 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A0J9YY10 115 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A1B0GX78 115 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CEACAM18A8MTB9 384 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CORTO00230 105 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 DEGS1O15121 323 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RTL8CO15255 209 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RBFOX2O43251 390 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CISD3P0C7P0 127 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CD79AP11912 226 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZNF708P17019 499 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RPS3P23396 243 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 TCTAP57738 103 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 GRB2P62993 217 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 PMVKQ15126 192 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 LAMTOR1Q6IAA8 161 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR10K2Q6IF99 312 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 DCUN1D2Q6PH85 259 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 UGT2A3Q6UWM9 527 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 C10orf107Q8IVU9 208 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 TERB2Q8NHR7 220 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 UBALD1Q8TB05 177 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 LINC01560Q8TB33 94 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RBPMSQ93062 196 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 PPCDCQ96CD2 204 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 LINC00052Q96N35 136 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAAP24Q9BTP7 215 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CHCHD7Q9BUK0 85 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RNASE7Q9H1E1 156 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RBM22Q9NW64 420 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 DNAJC27Q9NZQ0 273 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 TMEM216Q9P0N5 145 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 BTRCQ9Y297 605 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 ENPP4Q9Y6X5 453 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 KDM5AP29375 1690 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 PRDM15P57071 1507 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 PIK3C2GO75747 1445 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 DAPK1P53355 1430 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 MYOM3Q5VTT5 1437 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 UACAQ9BZF9 1416 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 CHD1O14646 1710 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A087WUU8 490 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A1B0GXF2 115 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 TRAPPC13A5PLN9 417 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR7C2O60412 319 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR7C1O76099 320 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 MPC2O95563 127 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 IGKV5-2P06315 115 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 FGF7P21781 194 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 PPP1CAP62136 330 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 HBA1P69905 142 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 BTG2P78543 158 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 CDK6Q00534 326 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 HIST1H1AQ02539 215 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 MEF2CQ06413 473 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 ADIGQ0VDE8 80 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 HTR4Q13639 388 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms