RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 OPRK1P41145 380 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 GZMMP51124 257 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 NCALDP61601 193 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CAV1Q03135 178 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SMAGPQ0VAQ4 97 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 LRRC26Q2I0M4 334 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 LINC00303Q3SY05 128 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PYY3Q5JQD4 70 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAM74A1Q5RGS3 127 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZNF684Q5T5D7 378 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 Q6P435 159 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZFP2Q6ZN57 461 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 DEFB128Q7Z7B8 93 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SLC30A7Q8NEW0 376 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR4E2Q8NGC2 313 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR13C6PQ8NH95 151 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR5K1Q8NHB7 308 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SLC37A2Q8TED4 501 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SKA2Q8WVK7 121 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CYGBQ8WWM9 190 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 BTF3L4Q96K17 158 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CNBD2Q96M20 576 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CCDC115Q96NT0 180 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 GPR82Q96P67 336 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 IP6K3Q96PC2 410 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 RBP7Q96R05 134 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR2M4Q96R27 311 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 APOL4Q9BPW4 351 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 LINC00470Q9BZP3 86 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 MAP1LC3BQ9GZQ8 125 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PRO1933Q9H354 126 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAM206AQ9NX38 181 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 MED29Q9NX70 200 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 SCP2D1Q9UJQ7 156 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ERG28Q9UKR5 140 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 PKIGQ9Y2B9 76 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 CABIN1Q9Y6J0 2220 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 VWA8A3KMH1 1905 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 NALCNQ8IZF0 1738 aa3.05□□□□□ -1.92
HMGB1P13-201ENST00000406019 ADAMTS12P58397 1594 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 GRIN2AQ12879 1464 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 GRIN2BQ13224 1484 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 DICER1Q9UPY3 1922 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 LOC102724200A0A096LPH7 203 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A0J9YY10 115 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A1B0GX78 115 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CEACAM18A8MTB9 384 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CORTO00230 105 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 DEGS1O15121 323 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RTL8CO15255 209 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RBFOX2O43251 390 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CISD3P0C7P0 127 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CD79AP11912 226 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZNF708P17019 499 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RPS3P23396 243 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 TCTAP57738 103 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 GRB2P62993 217 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 PMVKQ15126 192 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 LAMTOR1Q6IAA8 161 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR10K2Q6IF99 312 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 DCUN1D2Q6PH85 259 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 UGT2A3Q6UWM9 527 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 C10orf107Q8IVU9 208 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 TERB2Q8NHR7 220 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 UBALD1Q8TB05 177 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 LINC01560Q8TB33 94 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RBPMSQ93062 196 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 PPCDCQ96CD2 204 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 LINC00052Q96N35 136 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 FAAP24Q9BTP7 215 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 CHCHD7Q9BUK0 85 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RNASE7Q9H1E1 156 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 RBM22Q9NW64 420 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 DNAJC27Q9NZQ0 273 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 TMEM216Q9P0N5 145 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 BTRCQ9Y297 605 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 ENPP4Q9Y6X5 453 aa3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 KDM5AP29375 1690 aaKnown RBP3.04□□□□□ -1.92
HMGB1P13-201ENST00000406019 PRDM15P57071 1507 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 PIK3C2GO75747 1445 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 DAPK1P53355 1430 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 MYOM3Q5VTT5 1437 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 UACAQ9BZF9 1416 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 CHD1O14646 1710 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A087WUU8 490 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 A0A1B0GXF2 115 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 TRAPPC13A5PLN9 417 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR7C2O60412 319 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR7C1O76099 320 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 MPC2O95563 127 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 IGKV5-2P06315 115 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 FGF7P21781 194 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 PPP1CAP62136 330 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 HBA1P69905 142 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 BTG2P78543 158 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 CDK6Q00534 326 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 HIST1H1AQ02539 215 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 MEF2CQ06413 473 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 ADIGQ0VDE8 80 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 HTR4Q13639 388 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms