RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 BCL2L15Q5TBC7 163 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 ZCCHC24Q8N2G6 241 aaKnown RBP4.6□□□□□ -1.67
CNGA1-202ENST00000402813 DEFB125Q8N687 156 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 NUP35Q8NFH5 326 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 OR2T33Q8NG76 320 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 OR51G1Q8NGK1 321 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 C2orf15Q8WU43 125 aaKnown RBP4.6□□□□□ -1.67
CNGA1-202ENST00000402813 ZNF419Q96HQ0 510 aaPredicted RBP4.6□□□□□ -1.67
CNGA1-202ENST00000402813 FAM19A4Q96LR4 140 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 MIEN1Q9BRT3 115 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 HEXA-AS1Q9H8Q6 139 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 A0A0G2JMM0 328 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 LOC101059948A0A1B0GTJ6 334 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 A0A1W2PPB8 328 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 KIR3DP1A8MWS1 328 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 VWC2LB2RUY7 222 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 B4DXG7 233 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 LINC01619G3V211 115 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 SOCS2O14508 198 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 CDC42EP2O14613 210 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 PDCD5O14737 125 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 SLC2A10O95528 541 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 FGF6P10767 208 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 CA6P23280 308 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 TAF6P49848 677 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 HMGA2P52926 109 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 SEC61BP60468 96 aaKnown RBP4.6□□□□□ -1.67
CNGA1-202ENST00000402813 SRSF9Q13242 221 aaKnown RBP eCLIP4.6□□□□□ -1.67
CNGA1-202ENST00000402813 AWAT1Q58HT5 328 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 ZNF506Q5JVG8 444 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 SLC35E4Q6ICL7 350 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 MICAL3Q7RTP6 2002 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 PRIMA1Q86XR5 153 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 RBMXL3Q8N7X1 1067 aaKnown RBP4.6□□□□□ -1.67
CNGA1-202ENST00000402813 OR10AD1Q8NGE0 317 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 NEIL3Q8TAT5 605 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 SLIRPQ9GZT3 109 aaKnown RBP4.6□□□□□ -1.67
CNGA1-202ENST00000402813 JPT2Q9H910 190 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 CBLN4Q9NTU7 201 aa4.6□□□□□ -1.67
CNGA1-202ENST00000402813 J3QR89 54 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 NDUFS7O75251 213 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 REM1O75628 298 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 EPPINO95925 133 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 GPX1P07203 203 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 NHLRC4P0CG21 123 aaPredicted RBP4.59□□□□□ -1.67
CNGA1-202ENST00000402813 LINC00694P0DN24 101 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 HKR1P10072 659 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 HIST1H1DP16402 221 aaKnown RBP4.59□□□□□ -1.67
CNGA1-202ENST00000402813 NTF3P20783 257 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 PEA15Q15121 130 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 HRCT1Q6UXD1 115 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 TMUB2Q71RG4 321 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 MOB1BQ7L9L4 216 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 OR51A4Q8NGJ6 313 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 CT55Q8WUE5 264 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 KXD1Q9BQD3 176 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 MOB1AQ9H8S9 216 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 NOX3Q9HBY0 568 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 ZNF256Q9Y2P7 627 aaPredicted RBP4.59□□□□□ -1.67
CNGA1-202ENST00000402813 ATG2AQ2TAZ0 1938 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 A0A087WZ39 114 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 LOC102724200A0A096LPH7 203 aaPredicted RBP4.59□□□□□ -1.67
CNGA1-202ENST00000402813 TRAV5A0A0B4J249 113 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 APOC3P02656 99 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 CD1DP15813 335 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 CD38P28907 300 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 PFN2P35080 140 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 PPICP45877 212 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 POLR2JP52435 117 aaKnown RBP4.59□□□□□ -1.67
CNGA1-202ENST00000402813 SNRPGP62308 76 aaKnown RBP4.59□□□□□ -1.67
CNGA1-202ENST00000402813 EIF5AP63241 154 aaKnown RBP4.59□□□□□ -1.67
CNGA1-202ENST00000402813 COL10A1Q03692 680 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 SLC38A11Q08AI6 406 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 Q6ZVQ6 151 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 PIP4P1Q86T03 277 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 CDC20BQ86Y33 519 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 OR10D4PQ8NGN7 298 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 MRPS24Q96EL2 167 aaKnown RBP4.59□□□□□ -1.67
CNGA1-202ENST00000402813 GNB1LQ9BYB4 327 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 EHFQ9NZC4 300 aa4.59□□□□□ -1.67
CNGA1-202ENST00000402813 KLF13Q9Y2Y9 288 aaPredicted RBP4.59□□□□□ -1.67
CNGA1-202ENST00000402813 THSD7BQ9C0I4 1608 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 ZNF724A8MTY0 619 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 SLC35G6P0C7Q6 338 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 IGHV4-31P0DP07 118 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 FOLR3P41439 243 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 SMIM11AP58511 58 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 SRPXP78539 464 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 BEAN1Q3B7T3 259 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 SPANXN4Q5MJ08 99 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 C9orf57Q5W0N0 161 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 ZNF788Q6ZQV5 615 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 SGPP2Q8IWX5 399 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 Q8TCH9 128 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 ZNRF4Q8WWF5 429 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 ZNF501Q96CX3 271 aaPredicted RBP4.59□□□□□ -1.68
CNGA1-202ENST00000402813 OR4C12Q96R67 309 aa4.59□□□□□ -1.68
CNGA1-202ENST00000402813 OVOL1O14753 267 aa4.58□□□□□ -1.68
CNGA1-202ENST00000402813 NCR1O76036 304 aa4.58□□□□□ -1.68
CNGA1-202ENST00000402813 OR2A4O95047 310 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms