RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CARD17Q5XLA6 110 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 LIAT1Q6ZQX7 453 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 C1QL2Q7Z5L3 287 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 WFDC8Q8IUA0 241 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 H1FOOQ8IZA3 346 aaPredicted RBP4.5□□□□□ -1.69
VPS41-203ENST00000395969 C9orf106Q8NAJ2 232 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 TP53RKQ96S44 253 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 GSX1Q9H4S2 264 aaPredicted RBP4.5□□□□□ -1.69
VPS41-203ENST00000395969 BANF2Q9H503 90 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 PLA2G3Q9NZ20 509 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 PRSS50Q9UI38 385 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 COL6A3P12111 3177 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 VPS13AQ96RL7 3174 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 SEC16AO15027 2179 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 DEGS1O15121 323 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 CLEC3BP05452 202 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 BCL2P10415 239 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 FAHP16930 419 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 MTCP1P56278 107 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 PIGPP57054 158 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 RAB11AP62491 216 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 SLC35E4Q6ICL7 350 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 ZNF497Q6ZNH5 498 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 MDP1Q86V88 176 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 RTL8AQ9BWD3 113 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 LIME1Q9H400 295 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 LYRM2Q9NU23 88 aaPredicted RBP4.5□□□□□ -1.69
VPS41-203ENST00000395969 NECAP2Q9NVZ3 263 aa4.5□□□□□ -1.69
VPS41-203ENST00000395969 A0A1W2PN81 502 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 FAM24AA6NFZ4 105 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 NKX6-3A6NJ46 265 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CCL25O15444 150 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 THBDP07204 575 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 OMGP23515 440 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CHRNB4P30926 498 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CHRNA7P36544 502 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 GNMTQ14749 295 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 EFNB3Q15768 340 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 TBR1Q16650 682 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 COL5A1-AS1Q5SY13 56 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 TEX36Q5VZQ5 186 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 LEMD1Q68G75 181 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 MYO7BQ6PIF6 2116 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 TOMM20LQ6UXN7 152 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 C16orf82Q7Z2V1 217 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 ZCCHC14Q8WYQ9 949 aaKnown RBP4.49□□□□□ -1.69
VPS41-203ENST00000395969 CORO2AQ92828 525 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 ABHD17AQ96GS6 310 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 SRSF8Q9BRL6 282 aaKnown RBP4.49□□□□□ -1.69
VPS41-203ENST00000395969 FAM234AQ9H0X4 552 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 PLEKHF2Q9H8W4 249 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 ZNF581Q9P0T4 197 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CHTOPQ9Y3Y2 248 aaKnown RBP4.49□□□□□ -1.69
VPS41-203ENST00000395969 KIR2DS1A0A191URI9 304 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 A8MXE2 369 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 P0C879 139 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CGB3P0DN86 165 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CGB7P0DN87 165 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 GLRXP35754 106 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 KIR2DS4P43632 304 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 RAB7AP51149 207 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 LGALS4P56470 323 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 TMPRSS3P57727 454 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 UBE2NP61088 152 aaKnown RBP4.49□□□□□ -1.69
VPS41-203ENST00000395969 RANP62826 216 aaKnown RBP4.49□□□□□ -1.69
VPS41-203ENST00000395969 KIR2DS1Q14954 304 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 MMDQ15546 238 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 SP6Q3SY56 376 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 TPTE2P1Q5T6R2 138 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 LINC00696Q6ZRV3 163 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CYP2G1PQ6ZSU1 146 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 MBD3L1Q8WWY6 194 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 DYRK2Q92630 601 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 BORCS8Q96FH0 119 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 SPACA5Q96QH8 159 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 TBX15Q96SF7 602 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CXXC4Q9H2H0 198 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 NGBQ9NPG2 151 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 OR6C3Q9NZP0 311 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 RNF150Q9ULK6 438 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 LAMP3Q9UQV4 416 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 EYSQ5T1H1 3165 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 FAM166BA8MTA8 275 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 G3V3Y1 287 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 KLK10O43240 276 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 ZNF205O95201 554 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CDS2O95674 445 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 HRASP01112 189 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 GALR1P47211 349 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 CNN1P51911 297 aaKnown RBP4.49□□□□□ -1.69
VPS41-203ENST00000395969 TAS2R30P59541 319 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 ERVS71-1P61550 626 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 PPP1CBP62140 327 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 BAXQ07812 192 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 BHLHA15Q7RTS1 189 aaPredicted RBP4.49□□□□□ -1.69
VPS41-203ENST00000395969 WDR86Q86TI4 376 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 MCEMP1Q8IX19 187 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 LGI3Q8N145 548 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 TMEM252Q8N6L7 170 aa4.49□□□□□ -1.69
VPS41-203ENST00000395969 ORAOV1Q8WV07 137 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms