RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 HIST1H1BP16401 226 aaKnown RBP9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 COLCA1Q6ZS62 124 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 LINC00469Q8N7U9 141 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 KLF14Q8TD94 323 aaPredicted RBP9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 BCL2L2Q92843 193 aaPredicted RBP9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 U3KQA8 63 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 ZFHX2Q9C0A1 2572 aaPredicted RBP9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 TRBV6-6A0A0A6YYG2 114 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 A0A0G2JRQ6 117 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 DVL1O14640 695 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 GALR2O43603 387 aaPredicted RBP9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 VENTXO95231 258 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 CRISP2P16562 243 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 ZNF83P51522 516 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 ZNF497Q6ZNH5 498 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 FAM214BQ7L5A3 538 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 ZADH2Q8N4Q0 377 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 PXMP4Q9Y6I8 212 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 TRBV24-1A0A075B6N3 115 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 TRAV38-1A0A0B4J264 116 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 ATXN7O15265 892 aaPredicted RBP9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 SMPD2O60906 423 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 TMEM50AO95807 157 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 ACP1P24666 158 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 NPY1RP25929 384 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 PRDX2P32119 198 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 GNG4P50150 75 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 ERHP84090 104 aaKnown RBP9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 TGIF2LYQ8IUE0 185 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 ADTRPQ96IZ2 230 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 NPCDR1Q9BY65 106 aa9.86□□□□□ -0.83
UBE2D3-209ENST00000394804 IGHV2-5P01817 119 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 Q0VFX4 171 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 C3orf80F5H4A9 247 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 NEURL1O76050 574 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 NTF4P34130 210 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 RANP62826 216 aaKnown RBP9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 RPL23P62829 140 aaKnown RBP9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 PYY3Q5JQD4 70 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 PCSK4Q6UW60 755 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 REC114Q7Z4M0 266 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 HIST3H2BBQ8N257 126 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 ZDHHC16Q969W1 377 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 HS3ST6Q96QI5 342 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 FAM103A1Q9BTL3 118 aaKnown RBP9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 PARD6AQ9NPB6 346 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 WIPI2Q9Y4P8 454 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 IGKV1-6A0A0C4DH72 117 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 IGKV1-5P01602 117 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 SUB1P53999 127 aaKnown RBP eCLIP9.85□□□□□ -0.836e-14■■■■□ 20.3
UBE2D3-209ENST00000394804 MRPS11P82912 194 aaKnown RBP9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 TEPPQ6URK8 271 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 OR4P4Q8NGL7 312 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 OR4X1Q8NH49 305 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 TXN2Q99757 166 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 VAMP8Q9BV40 100 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 GP6Q9HCN6 339 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 NPVFQ9HCQ7 196 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 TMEM167BQ9NRX6 74 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 ICE1Q9Y2F5 2266 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 CEP250Q9BV73 2442 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 C17orf98A8MV24 154 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 WNT9BO14905 357 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 RPL29P47914 159 aaKnown RBP9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 GNG10P50151 68 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 TFF3Q07654 80 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 RTP5Q14D33 572 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 RPEL1Q2QD12 228 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 H1FXQ92522 213 aaKnown RBP9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 SLC35D1Q9NTN3 355 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 FOXJ2Q9P0K8 574 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 IL17BQ9UHF5 180 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 RPH3ALQ9UNE2 315 aa9.85□□□□□ -0.83
UBE2D3-209ENST00000394804 MGST3O14880 152 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 SSTR5P35346 364 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 WNT5AP41221 380 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 KLF3P57682 345 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 KRTDAPP60985 99 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 CA5BP1Q8WTZ4 195 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 DAZAP1Q96EP5 407 aaKnown RBP9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 SEBOXQ9HB31 216 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 LRP4O75096 1905 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 GFI1BQ5VTD9 330 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 TIMM8BQ9Y5J9 83 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 COL4A2P08572 1712 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 KIAA1324LA8MWY0 1029 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 C10orf142B7Z368 130 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 NTF3P20783 257 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 TMEM204Q9BSN7 226 aa9.84□□□□□ -0.83
UBE2D3-209ENST00000394804 M0R143 59 aa9.83□□□□□ -0.84
UBE2D3-209ENST00000394804 SP9P0CG40 484 aa9.83□□□□□ -0.84
UBE2D3-209ENST00000394804 EGR1P18146 543 aa9.83□□□□□ -0.84
UBE2D3-209ENST00000394804 MIC13Q5XKP0 118 aa9.83□□□□□ -0.84
UBE2D3-209ENST00000394804 FAM90A2PQ658T7 463 aa9.83□□□□□ -0.84
UBE2D3-209ENST00000394804 Q6ZRM9 215 aa9.83□□□□□ -0.84
UBE2D3-209ENST00000394804 SPINK4O60575 86 aa9.83□□□□□ -0.84
UBE2D3-209ENST00000394804 SOD3P08294 240 aa9.83□□□□□ -0.84
UBE2D3-209ENST00000394804 OR10J1P30954 320 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 1509.9 ms